Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2449g00007 ATGCCGAAGGCCAAAGCTGATGCCAAAGCCGCCGATAACCGGTTGAAGCGCAAGGGCGCTGGTGCCGGGAGGAAGCAATCGAAGAAGGCTGCTAAGGATCCTAACAAGCCTAAGAGGCCTCCTAGTGCTTTTTTCGTTTTCATGTCTGAGTTCAGAGAGCAGTTCAAGAAGGAGCATCCAGGCAACAAATCCGTTGCTGTTGTCGGTAAAGCTGGTGGTGCCAAGTGGAAATCGATGACTGATGCTGAGAAGGCTCCCTTCGTTGCTAGGGCAGAGAAGAAAAAGGAAGAGTATGATAAAAGTATTTTGGCATACAATAACAAATTGGAGGGTAAGAATTCAGAGGAGGATGAGTCTGACAAGTCAAAGTCGGAAGTCAATGATGATGAGGATGATGAGGAGGAGGAGGAGGATGACGAGTGA 423 0.4846 MPKAKADAKAADNRLKRKGAGAGRKQSKKAAKDPNKPKRPPSAFFVFMSEFREQFKKEHPGNKSVAVVGKAGGAKWKSMTDAEKAPFVARAEKKKEEYDKSILAYNNKLEGKNSEEDESDKSKSEVNDDEDDEEEEEDDE 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2449g00007 140 ProSiteProfiles HMG boxes A and B DNA-binding domains profile. 37 106 IPR009071 -
Mupr2449g00007 140 Pfam HMG (high mobility group) box 37 106 IPR009071 -
Mupr2449g00007 140 Gene3D High mobility group box domain 21 124 IPR036910 -
Mupr2449g00007 140 CDD HMG-box_AtHMGB1-like 38 98 - -
Mupr2449g00007 140 SMART hmgende2 36 107 IPR009071 -
Mupr2449g00007 140 MobiDBLite consensus disorder prediction 99 140 - -
Mupr2449g00007 140 MobiDBLite consensus disorder prediction 1 43 - -
Mupr2449g00007 140 Coils Coil 88 108 - -
Mupr2449g00007 140 PANTHER HIGH MOBILITY GROUP B PROTEIN 4-RELATED 4 139 IPR031061 -
Mupr2449g00007 140 MobiDBLite consensus disorder prediction 122 140 - -
Mupr2449g00007 140 SUPERFAMILY HMG-box 28 110 IPR036910 -
Mupr2449g00007 140 MobiDBLite consensus disorder prediction 1 19 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr2449g00007 Mupr-Chr2449 29779 30942 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR HMG Mupr2449g00007 HMG_box 1.2e-22 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr2449g00007 K25507 - gmx:100305957 197.208