Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2434g00003 ATGCCGCCGAAGTTCGACCCCTCTCAGGTTGTCGATGTCTTCGTCCGCGTGACCGGTGGTGAGGTCGGCGCGGCGAGTTCGCTCGCTCCGAAGATCGGTCCGCTCGGTCTATCCCCTAAGAAGATCGGAGAAGACATAGCGAAGGAGACAGCCAAAGACTGGAAGGGTCTGAGAGTGACCGTGAAGCTGACCGTGCAGAACCGTCAGGCGAAGGTCACTGTGGTTCCCTCCGCGGCGGCGCTGGTCATCAAGGCCCTGAAGGAGCCCGAGCGCGACCGTAAGAAGACCAAAAACATCAAGCACAATGGCAACATCTCGCTCGATGACGTCATCGAGATTGCAAGGATCATGAACCCGAGGTCCATGGCGAAGGACCTCAGCGGCACGATCAAGGAGATCCTCGGGACCTGCGTCTCCGTCGGATGTACTGTTGATGGAAAGGATCCCAAGGACTTGCAGCAGGAAATCACCGACGGTGATATTGAGGTTTGCATTAGAATTGAATCTGGAAAATATTTAACTCCATTGCAAGTTAAATATAAGTCAGTCTCGGCTGTACTGGGCGCTACTGTTAATTTCATATTTCTGGATACGCTTTATCCGATTGCTAAAAGCTAG 618 0.5324 MPPKFDPSQVVDVFVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVTVVPSAAALVIKALKEPERDRKKTKNIKHNGNISLDDVIEIARIMNPRSMAKDLSGTIKEILGTCVSVGCTVDGKDPKDLQQEITDGDIEVCIRIESGKYLTPLQVKYKSVSAVLGATVNFIFLDTLYPIAKS 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2434g00003 205 ProSitePatterns Ribosomal protein L11 signature. 131 146 IPR020785 GO:0003735|GO:0005840|GO:0006412
Mupr2434g00003 205 FunFam 60S ribosomal protein L12 1 81 - -
Mupr2434g00003 205 Gene3D - 82 164 IPR036769 -
Mupr2434g00003 205 Hamap 50S ribosomal protein L11 [rplK]. 9 146 IPR000911 GO:0003735|GO:0005840|GO:0006412
Mupr2434g00003 205 Gene3D - 1 81 IPR036796 -
Mupr2434g00003 205 SUPERFAMILY Ribosomal protein L11, C-terminal domain 76 149 IPR036769 -
Mupr2434g00003 205 FunFam 60S ribosomal protein L12 82 164 - -
Mupr2434g00003 205 SUPERFAMILY Ribosomal L11/L12e N-terminal domain 1 87 IPR036796 -
Mupr2434g00003 205 SMART rl11c 13 145 IPR000911 GO:0003735|GO:0005840|GO:0006412
Mupr2434g00003 205 PANTHER 60S RIBOSOMAL PROTEIN L12 1 151 IPR000911 GO:0003735|GO:0005840|GO:0006412
Mupr2434g00003 205 Pfam Ribosomal protein L11, N-terminal domain 15 69 IPR020784 -
Mupr2434g00003 205 Pfam Ribosomal protein L11, RNA binding domain 75 144 IPR020783 GO:0003735|GO:0005840|GO:0006412
Mupr2434g00003 205 CDD Ribosomal_L11 13 144 IPR000911 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr2434g00003 Mupr-Chr2434 31412 33739 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr2434g00003 1 163 Cytoplasmic Ribosomal Protein Gene Family AT3G53430 89.571 1.59e-106 301
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr2434g00003 K02870 - oeu:111369398 316.62