Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2432g00001 ATGCTCCATGATTCTCAGCCACCCATAAATATTGGAGCAGAATTGAGTACATTCCATTATGAATTGATCTCTGGCTCAGAGGAACATGTGAATTGTGCTGTGTGTCTCAACAAAATTGGAGAAGAGGATGAGGATATTAGAGTTCTTAGATGTAAACATGTCTATCACAAAGGTTGTTTGGATAGATGGGTTGGTTTCAAGAACGCCACGTGTCCTCTTTGCAGAGGATCAGTGGCTCCAACAAGGCCTATCGCTCACTCCGGAGCTGAGTTTTCTTCTGTCCAAAAGCATAACCGTGACACGTGGTGGCTACGCTGA 318 0.4434 MLHDSQPPINIGAELSTFHYELISGSEEHVNCAVCLNKIGEEDEDIRVLRCKHVYHKGCLDRWVGFKNATCPLCRGSVAPTRPIAHSGAEFSSVQKHNRDTWWLR 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2432g00001 105 SMART ringv_2 31 75 IPR011016 GO:0008270
Mupr2432g00001 105 ProSiteProfiles Zinc finger RING-type profile. 32 75 IPR001841 -
Mupr2432g00001 105 SUPERFAMILY RING/U-box 28 84 - -
Mupr2432g00001 105 SMART ring_2 32 74 IPR001841 -
Mupr2432g00001 105 Pfam Ring finger domain 31 75 IPR001841 -
Mupr2432g00001 105 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 10 82 IPR013083 -
Mupr2432g00001 105 PANTHER - 16 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr2432g00001 Mupr-Chr2432 879 1211 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr2432g00001 32 80 C3H Transcription Factor Family AT1G63840 50.000 6.02e-14 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr2432g00001 - K16282 cave:132178403 102.834