Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2430g00005 ATGGTTCAGCAAGAAATTCGAAGGGGTCCCTGGACAGAGCAGGAGGACTACAAATTGGTGTATTGTGTTAACATATTTGGAGATCGTAGATGGGACTTTATAGCTAAGGAATCAGGTTTGAATAGAACTGGTAAGAGTTGCAGGTTACGCTGGGTTAATTACCTCCACCCTGATCTCAAACGAGGCAAGCTCACACTCCAAGAAGAGCACCTCGTCATGGAGCTTCACTCCAAATTGGGAAATAGATGGTCGAGAATTGCTCGCAAGTTGCCGGGACGCACGGACAATGAGATTAAGAATTATTGGAGGACTCACATGAGGAAGAAAAAGGCTCAAGAGAAAAAGCGAGCATCGTCATCAACTGTGTCTTCTAGTTGTTGTCAATCTTCAGTGTCCTCAAACAACAATCATGTTGTGGATTCACATAATGGTTCCAAAGAGGGTGGAGAAGAAAGCTTTTATGACACAGGTGGACATGATGGTGACATGATGGGGTTAGTTAACGTTGGAGAAGACCAAGTTGGTGAAAAGGGTTATTCCTACTCTATGGATGATATATGGAAAGAAATTGTTGTGTCAGAAGAAGAGAACGTTTATAATCTGCAACCTGTCTATGATGGGCACAGTGAGGAAGGATGCAACTTCTCTTGTCCACCACCTTCAATTATGCCTTCTCCATCATGGGATGAGTACAATTCTTCTCACCTTCTATGGGTCATGGATGAAGAAGAAAGTAACAAGGTGTTATTCCCTACACTAAGTGACCAATATTTTTCCTGCTATGAACAAGGAAGCGCATTTCTAACTGGCTAA 813 0.4268 MVQQEIRRGPWTEQEDYKLVYCVNIFGDRRWDFIAKESGLNRTGKSCRLRWVNYLHPDLKRGKLTLQEEHLVMELHSKLGNRWSRIARKLPGRTDNEIKNYWRTHMRKKKAQEKKRASSSTVSSSCCQSSVSSNNNHVVDSHNGSKEGGEESFYDTGGHDGDMMGLVNVGEDQVGEKGYSYSMDDIWKEIVVSEEENVYNLQPVYDGHSEEGCNFSCPPPSIMPSPSWDEYNSSHLLWVMDEEESNKVLFPTLSDQYFSCYEQGSAFLTG 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2430g00005 270 FunFam MYB transcription factor 63 130 - -
Mupr2430g00005 270 ProSiteProfiles Myb-like domain profile. 3 55 IPR001005 -
Mupr2430g00005 270 SMART sant 7 57 IPR001005 -
Mupr2430g00005 270 SMART sant 60 108 IPR001005 -
Mupr2430g00005 270 FunFam Myb transcription factor 8 60 - -
Mupr2430g00005 270 CDD SANT 65 106 IPR001005 -
Mupr2430g00005 270 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 56 110 IPR017930 -
Mupr2430g00005 270 ProSiteProfiles Myb-like domain profile. 56 106 IPR001005 -
Mupr2430g00005 270 SUPERFAMILY Homeodomain-like 5 102 IPR009057 -
Mupr2430g00005 270 Pfam Myb-like DNA-binding domain 8 55 IPR001005 -
Mupr2430g00005 270 Pfam Myb-like DNA-binding domain 61 105 IPR001005 -
Mupr2430g00005 270 CDD SANT 10 55 IPR001005 -
Mupr2430g00005 270 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 3 55 IPR017930 -
Mupr2430g00005 270 MobiDBLite consensus disorder prediction 117 142 - -
Mupr2430g00005 270 Gene3D - 8 60 - -
Mupr2430g00005 270 MobiDBLite consensus disorder prediction 106 153 - -
Mupr2430g00005 270 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 3 125 IPR044676 GO:0003700|GO:0006355|GO:0043565
Mupr2430g00005 270 Gene3D - 64 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr2430g00005 Mupr-Chr2430 47096 48299 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr2430g00005 1 268 MYB Transcription Factor Family AT5G59780 54.275 5.11e-80 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mupr2430g00005 Myb_DNA-binding 8.1e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr2430g00005 K09422 - gmx:100776886 396.356