Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2429g00009 ATGACTTGTGGCTGCTGCTTTGGAGCCAAATCTATAAAGGAAAGACGCCCTTCTTATGTTCCTAATGAAATTGATGGCTATCCGCTAGATAATGTTAAGCAATTTTCTGATAAAGAACTTCGATTGGCAACTGATAATTATCATTCAAACAATAAGATAGGACGAGGAGGTTTTGGAACCGTTTACCAGGGAACCTTAAGAGATGGAAGACGTATAGCAGTGAAGACTCTCTCAGTTTGGTCAAAGCAGGGAGTTCGTGAATTTTTGACTGAAATTAAAACTTTGTCAAATGTTAAACATCCAAACCTTGTTGAATTGATTGGATTCTGCATTCAAGGACCTAGTCGTACATTAGTCTATGAGTATGTGGAAAATGGCAACCTTAATAGTGCACTACTTGGCACAAGGAATGAAAACACAAAACTAGACTGGAGAAAAAGATCTGCTATATGTATAGGTACTGCTAAGGGTCTTGCATTTCTTCATGAAGAACTTGCACCACCTATTGTGCACAGAGACATCAAAGCTAGTAATGTACTACTTGACAGAGACTTCAACCCCAAAATAGGTGATTTTGGGTTGGCCAAATTATTTCCAGATAACATCACTCACATTAGCACCAGAATTGCTGGAACAACTGGTTACTTAGCACCGGAATATGCATTAGGTGGCCAGTTAACCAAGAAAGCTGATATATACAGCTTTGGGGTTCTTATACTTGAAATAGTTAGTGGCAGAAGCAGCGCCAGAAGAACAAACGGGGAAGGATCACATAAATTCCTCTTGGAATGGGCCTGGCAACTTTATGAAGAGGGGAAATTGTTGGAATTTGTAGATCCAGAAATGGAAGAATTTCCCGAGGAAGAGGTGATTAGGTACATGAAGGTTGCACTTTTCTGCACACAGTCAGTAGCAAGTAGAAGGCCATTGATGATACAAGTTGTTGATATGCTATCCAAGGCAATCCAACTCAATGAGAAAGAACTTACAGCACCAGGATTCTTCACAGACGAAGGAGAATCCTCTAGGAAGAACTCATACCCTGTCTCTTCAATTACCTCTACTCATGTTACTATTACTCAGGTGACCCCACGGTGA 1098 0.4035 MTCGCCFGAKSIKERRPSYVPNEIDGYPLDNVKQFSDKELRLATDNYHSNNKIGRGGFGTVYQGTLRDGRRIAVKTLSVWSKQGVREFLTEIKTLSNVKHPNLVELIGFCIQGPSRTLVYEYVENGNLNSALLGTRNENTKLDWRKRSAICIGTAKGLAFLHEELAPPIVHRDIKASNVLLDRDFNPKIGDFGLAKLFPDNITHISTRIAGTTGYLAPEYALGGQLTKKADIYSFGVLILEIVSGRSSARRTNGEGSHKFLLEWAWQLYEEGKLLEFVDPEMEEFPEEEVIRYMKVALFCTQSVASRRPLMIQVVDMLSKAIQLNEKELTAPGFFTDEGESSRKNSYPVSSITSTHVTITQVTPR 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2429g00009 365 FunFam Putative LRR receptor-like serine/threonine-protein kinase 123 330 - -
Mupr2429g00009 365 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 31 344 - -
Mupr2429g00009 365 FunFam cold-responsive protein kinase 1 18 122 - -
Mupr2429g00009 365 ProSiteProfiles Protein kinase domain profile. 47 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr2429g00009 365 ProSitePatterns Protein kinases ATP-binding region signature. 53 75 IPR017441 GO:0005524
Mupr2429g00009 365 SUPERFAMILY Protein kinase-like (PK-like) 24 318 IPR011009 -
Mupr2429g00009 365 SMART serkin_6 47 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr2429g00009 365 Gene3D Transferase(Phosphotransferase) domain 1 123 334 - -
Mupr2429g00009 365 CDD STKc_IRAK 53 320 - -
Mupr2429g00009 365 Gene3D Phosphorylase Kinase; domain 1 21 122 - -
Mupr2429g00009 365 ProSitePatterns Serine/Threonine protein kinases active-site signature. 169 181 IPR008271 GO:0004672|GO:0006468
Mupr2429g00009 365 Pfam Protein kinase domain 47 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr2429g00009 Mupr-Chr2429 63349 66588 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr2429g00009 12 337 Receptor kinase-like Gene Family AT1G56120 49.697 1.81e-103 322
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mupr2429g00009 Pkinase 1.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr2429g00009 - - gmx:100809588 656.366