Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2429g00004 ATGATTTCCACAAGAATTGCCTTTGTTTTAAGGTTTGAGAGGTTCAACTTATTCGCCTCAGGGTTGTTCGATGTCTCTCACGATCAAATCATGAAAGCCAAAACACAAAGCACTATCAATGGCCTAAAATCGTCCACGTGCCACCCACCCACCTTCACCTTAGGGATAGATAAGACCATAAATAGAGGGCTTGATTGGAAGCAAACCTTGTTGCAGGCTGAAAACTTGGAGCTCCCAAAGCCTCCTCCTATGAGGAAACAACAGCAACAAACTCAGCCATCATCAGAGCCTTTGAAGTGTCCAAGATGTGACTCTACTAACACCAAATTTTGTTACTACAATAACTACAACAAGTCTCAGCCTCGCCATTTCTGCAGAGCTTGCAAGAGGCACTGGACCAAAGGTGGAACTCTACGCAATGTTCCTGTTGGTGGTGACAGGAAGAACAAGCGAGTCAAGAAATCAACCAATCCAACCACAGCCACCACCTCAAATGCCAACATGGATAGTGAATTGAGTCCCCACATCACAACTCCTCCTCTTGCAGTGGATGATCACAAAACCACACCTTCCTCTCTCTATCAATCCTTGTGCCTGCCACAACAGAATCTGATCAGCACCAAAGACTCAGAAGGCATTGGTAATGGCATCTTTCTGAGTTCATCTGTGCCTTTTTCTCAAAACCAAAGCCTTCTCTTCCCCTTCACCACATCAAACTCCTTTGACACAAACCCATGTGCAACATCAACCTCTTTGAAATCCTCCAGTGTGTATAAATACGGTGAAGAAGAGTTTAAACTAATGGAGGAGCCAACCATCAACAGCATAATGCCTAGCACTAGTGGCGGCACCAACACACAGCCATGGGAGATACTTGCAACAACTTCTGGCTTGGAAATGTCAAACTATTGGAGTTGGGAGGACATTGATTCGTTGGTCTCAACTGATCTAAATGTTCCCTGGGATGATTCTGATATCAAACCCTGA 987 0.4478 MISTRIAFVLRFERFNLFASGLFDVSHDQIMKAKTQSTINGLKSSTCHPPTFTLGIDKTINRGLDWKQTLLQAENLELPKPPPMRKQQQQTQPSSEPLKCPRCDSTNTKFCYYNNYNKSQPRHFCRACKRHWTKGGTLRNVPVGGDRKNKRVKKSTNPTTATTSNANMDSELSPHITTPPLAVDDHKTTPSSLYQSLCLPQQNLISTKDSEGIGNGIFLSSSVPFSQNQSLLFPFTTSNSFDTNPCATSTSLKSSSVYKYGEEEFKLMEEPTINSIMPSTSGGTNTQPWEILATTSGLEMSNYWSWEDIDSLVSTDLNVPWDDSDIKP 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2429g00004 328 ProSiteProfiles Zinc finger Dof-type profile. 98 152 IPR003851 GO:0003677|GO:0006355
Mupr2429g00004 328 MobiDBLite consensus disorder prediction 76 100 - -
Mupr2429g00004 328 MobiDBLite consensus disorder prediction 139 188 - -
Mupr2429g00004 328 ProSitePatterns Zinc finger Dof-type signature. 100 136 IPR003851 GO:0003677|GO:0006355
Mupr2429g00004 328 MobiDBLite consensus disorder prediction 155 174 - -
Mupr2429g00004 328 MobiDBLite consensus disorder prediction 84 100 - -
Mupr2429g00004 328 Pfam Dof domain, zinc finger 97 150 IPR003851 GO:0003677|GO:0006355
Mupr2429g00004 328 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 85 246 IPR045174 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr2429g00004 Mupr-Chr2429 14583 16715 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr2429g00004 98 154 C2C2-Dof Transcription Factor Family AT1G28310 84.483 4.85e-30 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Mupr2429g00004 zf-Dof 2.7e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr2429g00004 - - gmx:778119 447.203