Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2427g00001 ATGTTGGGATTCCAACATCTCACTAAAAGGCACATTCTCACCCTTTCTCTAATCATGACCAAGTGGTTTTCTGAGATGCTGGCAGCAACAAGAAGGTGTAAGGAGGTTTTTTCTTTGTGGGTTTTGGCTGCCAGTGGCGGTTATGCATTTGATCTTCTCATAAAAGTGGTTCAGAGAGAGCCATCAAAGGGCAGACCACAGAAGCTGGTTTTCTTGATGGGGCTTGCAAAGGAGCTGTCACGGGCCATTGCAGCACTTGAATTGCTAAATTTTGCTGCTAATGATGAGGCACTGTCTAAGGTGGCCCTATTGAGGAGTTTATTAAATGGAAATCTATTTATGGAATGGATATGTCCAGCTGTTGCACAAGCCTATCAATGCCATATGAATGCACGTGGAACAACTTACAGAGAAGAATCAGATATTGATAGTGACATTGTCAGGGGAAGAATCACAGTCAAAGGGATGGCTTGGAATATCATTCAAAAGCTTCCTGTTCAACAATTCAATTCCAGTAAAATGTTGAAATTGTACAATGACTCATGTTGCTCAATTTGCTTCCAGAATTTCGAGGATGAAGAATTTGTTAGGGCACTTCCAAAATGTGACCACTTTTTTCACTTAGTCTGCATAGACAAATGGCTAGTTCAACAAGGATCATGCCCCATGTGTAGAATTTATGTTCCACATTTATGA 696 0.4095 MLGFQHLTKRHILTLSLIMTKWFSEMLAATRRCKEVFSLWVLAASGGYAFDLLIKVVQREPSKGRPQKLVFLMGLAKELSRAIAALELLNFAANDEALSKVALLRSLLNGNLFMEWICPAVAQAYQCHMNARGTTYREESDIDSDIVRGRITVKGMAWNIIQKLPVQQFNSSKMLKLYNDSCCSICFQNFEDEEFVRALPKCDHFFHLVCIDKWLVQQGSCPMCRIYVPHL 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2427g00001 231 ProSiteProfiles Zinc finger RING-type profile. 183 225 IPR001841 -
Mupr2427g00001 231 SMART ring_2 183 224 IPR001841 -
Mupr2427g00001 231 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 147 230 IPR013083 -
Mupr2427g00001 231 PANTHER NEP1-INTERACTING PROTEIN-LIKE 2 93 225 IPR044523 -
Mupr2427g00001 231 SUPERFAMILY RING/U-box 175 229 - -
Mupr2427g00001 231 Pfam Ring finger domain 183 225 IPR001841 -
Mupr2427g00001 231 CDD RING-H2_EL5-like 182 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr2427g00001 Mupr-Chr2427 8086 10629 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr2427g00001 78 225 C3H Transcription Factor Family AT1G74410 34.459 2.22e-23 92.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr2427g00001 - K19041 gmx:100799697 305.064