Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2419g00001 ATGGAAGGGGTTTCGAGGGAGGCTCAATTGTCGATTGCCGCTTCCTCCATGTTTCCCGGCTTTAGATTCTGTCCCACCGATGACGAGCTGCTTTCTTATTACCTTAGGAAGAAGTTGGACGGTCATGAAGAGAGTGTTCAAGTCATTTCTGAGGTCGAGCTTTGTAAATACGAGCCTTGGGATTTACCAGCCAAATCATTCATTCAATCAGATAACGAATGGTTCTTCTTCTCTCCCCGTGGAAGAAAGTACCCAAATGGTTCACAAAGTAAAAGAGCTACTGAATCTGGATATTGGAAGGCCACTGGCAAGGAGCGTAATGTGAAGTCAGGTTCCAATGTTATAGGAACGAAGCGGACTTTGGTGTTCCACTTAGGGCGTGCACCTAAAGGGGAGAGGACTGAATGGATTATGCATGAGTACTGCATCAATGACAAGTCTCAGGATTCTTTGGTCATTTGTCGCCTCAAGAGGAACGCAGAGTTCCGTTTGAGTGATGCTTCGAATAGAGCTTCTTCAAGTCAAAGGCACCCCGTGCATTCACATGAAAGTGGTTGTGCTATCTCAGAAGGTGATATTGATCAAAGGGGTGTCTGTGAGCAAGATAAAGAGGTTGGGTGTAGCTCCAAGAGGAGCAGTAGCAGTTATGGTTCTCCTTCAACAGAGCAAATAGAATCTGCATCCGAATCGAATCTGCGACCAGCAAACGAAGCTACTTTGACAGAATCTTCAGGTCAACAAAAGGAGGTGTATGAAGAAGATTGTTATGCTGAGATACTAAAGGATGATATAATCAAATTAGATGAATCATCAATCTTGGAAGAGGGTTACACAAGACCACAGGATCCTGCACAGGTGCATCCTGCACAAGGCACGGCACAACGGAGAATAAGATTAAGGGTTGGGAATTCAAAGCATTCTACGGCAGTAGTTCGTTCCCCAAGCAAAATGCACATGTCAAAGAAGGCCTTCTTAGTCAGAATAACCAATCGTTTGGTGTCTTATATTTTGGTCTCTACTGGGTGGACTCAAGTGAAGTATTATGTGGGAAATTTTCGGGTGTTCGCTCTGTAA 1074 0.4451 MEGVSREAQLSIAASSMFPGFRFCPTDDELLSYYLRKKLDGHEESVQVISEVELCKYEPWDLPAKSFIQSDNEWFFFSPRGRKYPNGSQSKRATESGYWKATGKERNVKSGSNVIGTKRTLVFHLGRAPKGERTEWIMHEYCINDKSQDSLVICRLKRNAEFRLSDASNRASSSQRHPVHSHESGCAISEGDIDQRGVCEQDKEVGCSSKRSSSSYGSPSTEQIESASESNLRPANEATLTESSGQQKEVYEEDCYAEILKDDIIKLDESSILEEGYTRPQDPAQVHPAQGTAQRRIRLRVGNSKHSTAVVRSPSKMHMSKKAFLVRITNRLVSYILVSTGWTQVKYYVGNFRVFAL 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2419g00001 357 SUPERFAMILY NAC domain 10 157 IPR036093 GO:0003677|GO:0006355
Mupr2419g00001 357 Gene3D NAC domain 26 176 IPR036093 GO:0003677|GO:0006355
Mupr2419g00001 357 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 16 238 - -
Mupr2419g00001 357 MobiDBLite consensus disorder prediction 166 180 - -
Mupr2419g00001 357 MobiDBLite consensus disorder prediction 166 187 - -
Mupr2419g00001 357 MobiDBLite consensus disorder prediction 207 249 - -
Mupr2419g00001 357 MobiDBLite consensus disorder prediction 208 246 - -
Mupr2419g00001 357 Pfam No apical meristem (NAM) protein 19 142 IPR003441 GO:0003677|GO:0006355
Mupr2419g00001 357 ProSiteProfiles NAC domain profile. 17 159 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr2419g00001 Mupr-Chr2419 1443 6605 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr2419g00001 4 285 NAC Transcription Factor Family AT2G27300 52.837 7.05e-98 292
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mupr2419g00001 NAM 6.2e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr2419g00001 - - tpra:123896537 518.464