Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2415g00001 ATGAGTTGCAACGGTTGCCGAGTGCTCCGAAAGGGGTGCAGCGAGACATGCCCTCTGAGGTCGTGCCTGCAGTGGATCGAATCTCCGGAATCACAACAACACGCCACTCTCTTCCTCGCTAAGTTCTTTGGTCGTAGCGACCTAATGTCCTTCGCTGCTTCTGTCCCCGAAACCAAAAGACCTGGGTTGTTTCAGTCTCTGCTATTTGAAGGGTGCGGGCGAATGGTAAATCCGGTGAACGGTGCCGTGGGACTTCTGTGGAGCGGTAACTGGCACGTGTGCGAGGCCGCTGTGGAGACGGTGCTCGCCGGAGGCGTTCTTCGTCCGTCGCCGGAGACATTCGCCGGAGTCTCCAATAAACAGAATTTAAATCTGTTCCTGTAA 384 0.5547 MSCNGCRVLRKGCSETCPLRSCLQWIESPESQQHATLFLAKFFGRSDLMSFAASVPETKRPGLFQSLLFEGCGRMVNPVNGAVGLLWSGNWHVCEAAVETVLAGGVLRPSPETFAGVSNKQNLNLFL 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2415g00001 127 ProSiteProfiles LOB domain profile. 1 107 IPR004883 -
Mupr2415g00001 127 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 118 - -
Mupr2415g00001 127 Pfam Lateral organ boundaries (LOB) domain 2 101 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr2415g00001 Mupr-Chr2415 4866 6166 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr2415g00001 1 109 AS2 family AT4G37540 80.734 4.98e-62 188
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mupr2415g00001 LOB 1.3e-23 No_clan