Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2399g00003 ATGTTTTCAATAGGAAAAACAGCATGTGAGGAAGAGAAGGACAAGGATGGTGATGAGAGGGAAGTGGAGGAAGCAGTGAATGAGGATAATAAAGAAGAGAATATAAGAATAAAGGTAGTGTGTGGTAAGGATTCAAGAAAAGCCTCATCTTCCAGACATAGTTTTTGTCAGGCCGATGAATGTGGGATGGACTTGAGCATGGCCAAGAGCTACAACCGCCGTCACAAGATTTGTGACCGACATTCTAAGGCTCCTGTCGTTTTAGTTTCTAGCACTCGTCAGCGCTTCTGCCAACAATGTAGCAGGTTCCATGAACTTGCAGAGTTTGATGGGAACAAAAGAAGTTGCAGGATAAGATTGTCAGGGCATAATGAACGTAGAAGAAAGGCTCGCGCAGACCTATCCTTAGGAGGTTATGTTTCACGTTAG 429 0.4382 MFSIGKTACEEEKDKDGDEREVEEAVNEDNKEENIRIKVVCGKDSRKASSSRHSFCQADECGMDLSMAKSYNRRHKICDRHSKAPVVLVSSTRQRFCQQCSRFHELAEFDGNKRSCRIRLSGHNERRRKARADLSLGGYVSR 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2399g00003 142 Gene3D - 45 117 IPR036893 GO:0003677|GO:0005634
Mupr2399g00003 142 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 47 131 IPR044817 GO:0003677
Mupr2399g00003 142 ProSiteProfiles Zinc finger SBP-type profile. 53 130 IPR004333 GO:0003677
Mupr2399g00003 142 MobiDBLite consensus disorder prediction 1 29 - -
Mupr2399g00003 142 Pfam SBP domain 56 129 IPR004333 GO:0003677
Mupr2399g00003 142 SUPERFAMILY SBT domain 55 133 IPR036893 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr2399g00003 Mupr-Chr2399 25993 27290 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr2399g00003 3 133 SBP-box Gene Family AT3G60030 49.618 4.70e-32 117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Mupr2399g00003 SBP 6.8e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr2399g00003 - - gmx:100820357 187.193