Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2398g00004 ATGTCTCCAGTCCTCAGTGAAATCCTCCGTTCCGGGATGGCCTCATGGAGTGGAAGCTCGAGCATGAGCACAAAGTTGATTGAGAGGTGTGGGTCGGAGGAGGAGTTGCAGGTTCTGATGGAACAGAGAAAATGGAAGAGAAAGCAATCAAATAGGGAATCGGCGAAAAGATCACGGAAGCGAAAGCAAGAGCACGTGGATGACCTAATTGCACAATTGGACCGCCTCAAAAAGGAAAATAGCCTAATCCTCACCAAAGTGAACATCACCACACAACACTATCTCAATGTCCAGGCTCAAAATTCCGTTCTCAGGGCCCAGAAGACCGAACTCACCCAAACCTTGCAATCACTCAATGATATCATCTACCTCATCAACTCAACCACCGCCCTCTACCAAACCGATTATTGCTATCTCTCAACTGAATCAGATCATAACAATAACAATAATTATTTCATCAATCCCATGCACATGCCCTATCTCAACCAACCAATTGTGGCCGCTGCAGACATGTTCCAGTGGTGA 525 0.4629 MSPVLSEILRSGMASWSGSSSMSTKLIERCGSEEELQVLMEQRKWKRKQSNRESAKRSRKRKQEHVDDLIAQLDRLKKENSLILTKVNITTQHYLNVQAQNSVLRAQKTELTQTLQSLNDIIYLINSTTALYQTDYCYLSTESDHNNNNNYFINPMHMPYLNQPIVAAADMFQW 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2398g00004 174 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 46 61 IPR004827 GO:0003700|GO:0006355
Mupr2398g00004 174 SUPERFAMILY Leucine zipper domain 43 97 IPR046347 GO:0003700|GO:0006355
Mupr2398g00004 174 FunFam BZIP transcription factor 41 92 - -
Mupr2398g00004 174 Coils Coil 59 86 - -
Mupr2398g00004 174 Gene3D - 41 96 - -
Mupr2398g00004 174 CDD bZIP_plant_GBF1 46 94 IPR045314 GO:0003700|GO:0006355
Mupr2398g00004 174 PANTHER BZIP TRANSCRIPTION FACTOR 44 31 170 - -
Mupr2398g00004 174 SMART brlzneu 39 103 IPR004827 GO:0003700|GO:0006355
Mupr2398g00004 174 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 41 104 IPR004827 GO:0003700|GO:0006355
Mupr2398g00004 174 Pfam bZIP transcription factor 42 89 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr2398g00004 Mupr-Chr2398 16844 17625 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr2398g00004 39 174 bZIP Transcription Factor Family AT4G34590 51.095 7.79e-40 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Mupr2398g00004 bZIP_1 5.4e-10 CL0018