LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mupr2392g00001	ATGGACCCATGGCTCGACGATCTAGCCGATGACCTCCAGAGCCTCAGCTTCGCCTCCACCGCCACCGCCGACATCAAGCGGAGCACCAGCTTTGGCTCCGAAACTACCACGTTAACCGCCTCTAGCTCCGCCCACCTCCCTGCCAACAAACCCCACGCGCCCTCTGCCGACCCCCGCTGGACTGCCATCCACCGGATCCGATCAGAGTCCCCGAGCCGCCGCATCCTCCCCTCCGACCTTCGGTTCTCCCGCCGCCTGGGCTCCGGCGACATAAGCTCCGTCTACCTCGCCGAACTCAACGACGGGTCCCTCTCGGTGATGTTCGCCGCCAAGGTCATGGACAAGAAGGAGCTCGCCAGCCGCAGCAAGGAAGGTAGAGCCAAAACCGAAAGGGAAATCCTCGAATCCCTCGACCACCCCTTTTTGCCCACTCTCTACGCCACCATCGACGCCGCCAAATGGCTCTGCCTCCTCACCGAGTTCTGCCCCGGCGGCGACCTCCACGTCCTCCGCCAACGCCAGCCCAACAAACGCTTCCCCGAACCCGCCGTCAGGTTCTACGCATCAGAGGTGTTAGTGGCACTTGAATACCTTCACATGTTGGGGATAGTGTACCGTGATCTGAAGCCGGAGAACGTGTTAGTCCGATCAGATGGCCACATCATGCTCACTGATTTTGACCTGTCGTTAAAATGCGATGATTCGACATCAACGCCCCAGATCATCTTGGATAAAAAAAACACTCCTCGCATGGGCCCACACAAGGATCCCCACGTGGAAGCCTCTCAATTCACCTCGTCTTCGTGCATAATACCGAACTGTATAGTTCCCGCAGTGTCGTGTTTCCACCCAAAACGCAAGCGAAAGAAGAAGCAGAGCCAACATAACGGGCCTGAATTTGTAGCCGAGCCCATTGATGTCCGGTCCATGTCATTCGTGGGGACCCACGAGTACTTGGCTCCGGAAATCGTGTCCGGGGAGGGCCACGGTAGTGCGGTGGACTGGTGGACGTTAGGGATATTTATATTTGAATTGTTTTATGGTGTCACACCCTTTAGGGGCATGGACAATGAGCTAACCCTAGCAAACATCGTGGCTCGAGCCTTGGAGTTCCCAAAGGAACCCGCCGTGCCAGCCACGGCAAAGGACCTTATCTCTCAGTTATTGGTTAAGGACCCTTCAAGGAGGCTGGGCTCAACAATGGGGGCTTCTGCCATCAAGCACCACCCCTTTTTTCAAGCTGTTAATTGGGCATTGCTAAGGTGTACACCTCCACCCTTTGTGCCCCCACCTTATATTAAACAACCTGTATCTGATGAAATTGAAACTTGTCCACAGACTCCCATTGATTACTATTGA	1359	0.5563	MDPWLDDLADDLQSLSFASTATADIKRSTSFGSETTTLTASSSAHLPANKPHAPSADPRWTAIHRIRSESPSRRILPSDLRFSRRLGSGDISSVYLAELNDGSLSVMFAAKVMDKKELASRSKEGRAKTEREILESLDHPFLPTLYATIDAAKWLCLLTEFCPGGDLHVLRQRQPNKRFPEPAVRFYASEVLVALEYLHMLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSTSTPQIILDKKNTPRMGPHKDPHVEASQFTSSSCIIPNCIVPAVSCFHPKRKRKKKQSQHNGPEFVAEPIDVRSMSFVGTHEYLAPEIVSGEGHGSAVDWWTLGIFIFELFYGVTPFRGMDNELTLANIVARALEFPKEPAVPATAKDLISQLLVKDPSRRLGSTMGASAIKHHPFFQAVNWALLRCTPPPFVPPPYIKQPVSDEIETCPQTPIDYY	452

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mupr2392g00001	452	MobiDBLite	consensus disorder prediction	32	57	-	-
	Mupr2392g00001	452	SUPERFAMILY	Protein kinase-like (PK-like)	60	440	IPR011009	-
	Mupr2392g00001	452	Pfam	Protein kinase domain	309	412	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mupr2392g00001	452	Pfam	Protein kinase domain	83	238	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mupr2392g00001	452	FunFam	serine/threonine-protein kinase D6PK-like	307	430	-	-
	Mupr2392g00001	452	FunFam	serine/threonine-protein kinase D6PKL2	79	165	-	-
	Mupr2392g00001	452	SMART	serkin_6	80	412	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mupr2392g00001	452	MobiDBLite	consensus disorder prediction	32	48	-	-
	Mupr2392g00001	452	PANTHER	FLIPPASE KINASE 1-RELATED	30	431	-	-
	Mupr2392g00001	452	FunFam	serine/threonine-protein kinase D6PK-like	166	233	-	-
	Mupr2392g00001	452	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	203	215	IPR008271	GO:0004672\|GO:0006468
	Mupr2392g00001	452	Gene3D	Transferase(Phosphotransferase) domain 1	166	237	-	-
	Mupr2392g00001	452	CDD	STKc_phototropin_like	78	423	-	-
	Mupr2392g00001	452	Gene3D	Phosphorylase Kinase; domain 1	79	165	-	-
	Mupr2392g00001	452	ProSiteProfiles	Protein kinase domain profile.	80	412	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mupr2392g00001	452	Gene3D	Transferase(Phosphotransferase) domain 1	308	430	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mupr2392g00001	Mupr-Chr2392	3156	6778	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mupr2392g00001	1	452	AGC Kinase Gene Family	AT3G44610	67.811	0.0	595

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	AGC_RSK-2	Mupr2392g00001		Pkinase	7e-33	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mupr2392g00001	K08286		-	gmx:100792738	845.884