Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr238g00011 ATGAAGGTAGGTGGTAAAAAACAAGGTGCAATGTCGCCATGCGCAGCATGCAAGCTTCTTCGAAGGAAATGCGCACAGGATTGTGTATTTGCTTCTTATTTCCCTGCAGATGAGCCCCATAAGTTTGCCAGTGTCCACAAGGTTTTTGGGGCTAGCAATGTCAACAAAATGTTACAGGAGTTACCAGAGCACCAACGAAGTGATGCGGTTAGTTCAATGGTATATGAAGCCAATGCAAGGGTGAGGGATCCTGTGTATGGATGTGTGGGAGCTATATCCTCTCTGCAGCAACAAGTTGATGTGTTACAAACCCAATTGGCACTTGCACAAGCAGAGATTGTGCACATGAGAATGCGCCAAGTGCCAACTTCATCTGATCAACACAAACCAGTGCCTGCAGCCTCCAATTTATCCTCAGAGAACTTGTTATTCCCTTCAAGTAGGCTCGTCAAGTCCCGTTTTGCTATGGACATGGTCGTTGATCAACCAAACATAGGGGAATCCTTGTGGTCA 513 0.462 MKVGGKKQGAMSPCAACKLLRRKCAQDCVFASYFPADEPHKFASVHKVFGASNVNKMLQELPEHQRSDAVSSMVYEANARVRDPVYGCVGAISSLQQQVDVLQTQLALAQAEIVHMRMRQVPTSSDQHKPVPAASNLSSENLLFPSSRLVKSRFAMDMVVDQPNIGESLWS 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr238g00011 171 Coils Coil 92 112 - -
Mupr238g00011 171 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 11 133 - -
Mupr238g00011 171 ProSiteProfiles LOB domain profile. 12 113 IPR004883 -
Mupr238g00011 171 Pfam Lateral organ boundaries (LOB) domain 13 110 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr238g00011 Mupr-Chr238 42640 47581 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr238g00011 1 171 AS2 family AT1G31320 66.667 8.87e-69 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mupr238g00011 LOB 8.9e-43 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr238g00011 - - ccaj:109811748 265.003