Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2362g00003 ATGGAAGAGTCATGTGCTTTGTGTGAGAAAAAGGCTATGATTCATTGCGACTCAGACCAGGCTAAGCTATGTCGGGACTGTGATGAGAAAGTTCACAGTGTCAATTTCTTGGTGGCTAAGCATTCCAGGGTCCTTCTATGTTGTTCATGCTATTCCCCAACTCCGTGGAAGGCCTCAGGCACAAAACTCACACCCACTGTGTCGTTTTGTCACTCTTGCACTGCGAATCCACACGCCAGGTTAAATCAAGTGAATAATAATGTTCAACATCATCGTGATTTTGTGGAGGGTGATGGGAAACATGAATTTCATAATGTTTCTGATCATGATGAAGAAGTTCCAATGTCCTCGGATTCTGCCACCTCACCACATTCTGCCGATTCCCATGATGAGGAGGTAGTGTGTTCTTCAGCGAAAATACCTAGTGCTGCATTGATCAATGATGCTGAATCAACTTCTATGAGCATACAAGGAGATATGTAA 483 0.4369 MEESCALCEKKAMIHCDSDQAKLCRDCDEKVHSVNFLVAKHSRVLLCCSCYSPTPWKASGTKLTPTVSFCHSCTANPHARLNQVNNNVQHHRDFVEGDGKHEFHNVSDHDEEVPMSSDSATSPHSADSHDEEVVCSSAKIPSAALINDAESTSMSIQGDM 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2362g00003 160 MobiDBLite consensus disorder prediction 99 115 - -
Mupr2362g00003 160 MobiDBLite consensus disorder prediction 99 133 - -
Mupr2362g00003 160 SMART bboxneu5 1 46 IPR000315 GO:0008270
Mupr2362g00003 160 CDD Bbox1_BBX-like 5 46 - -
Mupr2362g00003 160 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 4 100 - -
Mupr2362g00003 160 Pfam B-box zinc finger 4 45 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr2362g00003 Mupr-Chr2362 20188 21504 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr2362g00003 1 113 C2C2-CO-like Transcription Factor Family AT4G27310 44.248 1.63e-28 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mupr2362g00003 zf-B_box 3.1e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr2362g00003 - - pvu:PHAVU_011G1498000 167.548