Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2361g00002 ATGAAAGAGAGTGGTAGAAAACAAGGTACAATGTCGCCATGTGCGGCTTGCAAGCTTCTTCGAAGGAGATGCACGAGGGATTGTGTGTTTGCTCCTTATTTTCCTGCTGATGAACCCCAGAAGTTTGGCAGTGTCCACAAGGTTTTTGGGGCTAGCAATGTGAACAAAATGCTACAGGAATTACCTGAACACCAAAGAAGTGATGCTGTTAGTTCGATGGTATATGAAGCGAATGCAAGGGTGAGGGACCCTGTGTATGGATGTGTGGGAGCCATATCCTCTCTTCAGCAACAGGTTGATGTGCTTCAAACTCAATTGGCACTGGCACAAGCAGAGGTTGTGCACATGAGAATGCGCCAATTCTCAACACCATTACATGATCATCAGAACCAACCCTCAGCAGTGCCTCCTGAAGGCTCCAATTCATCATCAGAGAACTTGTATCAATCAAGCAGGCTCTTATCTTCGCAAACCAAGTCCCTTTTTGGCATGGACATGGTCGTTGATCAGGCCAACATGGGGCAATCCTTGTGGTCATACTAG 543 0.4678 MKESGRKQGTMSPCAACKLLRRRCTRDCVFAPYFPADEPQKFGSVHKVFGASNVNKMLQELPEHQRSDAVSSMVYEANARVRDPVYGCVGAISSLQQQVDVLQTQLALAQAEVVHMRMRQFSTPLHDHQNQPSAVPPEGSNSSSENLYQSSRLLSSQTKSLFGMDMVVDQANMGQSLWSY 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2361g00002 180 Coils Coil 92 112 - -
Mupr2361g00002 180 Pfam Lateral organ boundaries (LOB) domain 13 110 IPR004883 -
Mupr2361g00002 180 ProSiteProfiles LOB domain profile. 12 113 IPR004883 -
Mupr2361g00002 180 MobiDBLite consensus disorder prediction 124 150 - -
Mupr2361g00002 180 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 10 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr2361g00002 Mupr-Chr2361 32534 36672 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr2361g00002 1 179 AS2 family AT1G31320 67.033 5.24e-72 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mupr2361g00002 LOB 3.5e-43 No_clan