Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2350g00011 ATGTCAACCCGTAGATATGCTTTTGGAAGGGCTGATGAGGCCACCCATCCAGACTCCATGAGGGCCACTTTGGCTGAATTTGCCTCCACTTTCATCTTTGTCTTTGCTGGAGAAGGCTCTGGCCTTGCTATGGTTAAGATTTACCAGGATTCAGCTTTCTCATCTGGTGAATTATTGGCAATTGCACTTGCACATGCATTAGCTTTATTTGCTGCGGTGTCTGCTAGCATGCATGTATCAGGTGGCCATGTCAACCCGGCTGTGACATTCGGTGCTCTCATTGGGGGAAGGATCTCTGTGGTCCGTGCCGTATACTACTGGATTGCTCAACTTCTAGGTTCTATAGTGGCTGCCCTCTTGCTCAGGCTTGTCACTAATAACATGAGACCATCAGGGTTCCACCTGACTCCAGGTGTTGGAGCAGTACACATGCTTATACTTGAGATTGTCATGACATTTGGGCTTATGTACACTGTGTATGGTACTGCAATTGATCCCAAAAGGGGAACTATTAGCACCATTTCACCCTTGGCAATTGGACTCGTAGTTGGGGCAAACATCCTTGTTGGTGGGCCATTTGATGGAGCATGCATGAACCCTGCTCTGGCTTTTGGGCCTTCCTTAGTGGGCTGGAGGTGGCACTACCATTGGATCTTCTGGGTGGGTCCATTGATTGGGGCAGCACTGGCAGCACTGCTGTATGAATATGTTGTGATCCCAACTGAGACCCCTCATCATACACACCAGCCTTTGGCTCCCGAAGATTACTATGTTATTTTATTAGTTGCATTGTACGAGTGTTATTAG 807 0.4796 MSTRRYAFGRADEATHPDSMRATLAEFASTFIFVFAGEGSGLAMVKIYQDSAFSSGELLAIALAHALALFAAVSASMHVSGGHVNPAVTFGALIGGRISVVRAVYYWIAQLLGSIVAALLLRLVTNNMRPSGFHLTPGVGAVHMLILEIVMTFGLMYTVYGTAIDPKRGTISTISPLAIGLVVGANILVGGPFDGACMNPALAFGPSLVGWRWHYHWIFWVGPLIGAALAALLYEYVVIPTETPHHTHQPLAPEDYYVILLVALYECY 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2350g00011 268 ProSitePatterns MIP family signature. 83 91 IPR022357 -
Mupr2350g00011 268 PRINTS Major intrinsic protein family signature 217 237 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mupr2350g00011 268 PRINTS Major intrinsic protein family signature 147 165 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mupr2350g00011 268 PRINTS Major intrinsic protein family signature 65 89 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mupr2350g00011 268 PRINTS Major intrinsic protein family signature 102 121 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mupr2350g00011 268 PRINTS Major intrinsic protein family signature 180 202 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mupr2350g00011 268 PRINTS Major intrinsic protein family signature 21 40 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mupr2350g00011 268 SUPERFAMILY Aquaporin-like 13 247 IPR023271 -
Mupr2350g00011 268 FunFam Probable aquaporin TIP1-1 4 252 - -
Mupr2350g00011 268 NCBIfam MIP family channel protein 25 234 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mupr2350g00011 268 Gene3D Glycerol uptake facilitator protein. 4 248 IPR023271 -
Mupr2350g00011 268 PANTHER AQUAPORIN-8 6 245 IPR034294 -
Mupr2350g00011 268 CDD MIP 21 237 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mupr2350g00011 268 Pfam Major intrinsic protein 14 234 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr2350g00011 Mupr-Chr2350 78139 80135 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr2350g00011 2 256 Major Intrinsic Protein MIP AT1G73190 70.076 5.00e-124 352
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr2350g00011 K09873 - gmx:100817450 451.055