Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2312g00002 ATGCACTTGCAGAAAATAGTATGCATGTGCCGTTTCGAAACTCAACTGACTAGATTACTTCGTGATTCATTCCGAGATGTTGACAACGGTATAAAAGACACATCCAACCAGTTTTCATCACAACCCTCGAGTTTCCTTGCTATGAAGGTGGAAAATATGGTAAAATTAAAGGAGGACTTTGATTACAAAAGCTTATGTAGAAGGCTAGACATAGAATTAGACAAACTCACTATGGAATATGAAAGGCAGCAGAAGGCATTTGAGGATGATATTGAAACATTGACCAAAGAAGCACAGCACCGGATATCAGAAGCCCAAAAGAACTACTCTGATTTGTTGGAGAAGGAAAGATTGAAATATCAGAAAGACTATAAGGAATCAATTAAGAGGCTTGAAGAGAAGGTGATGGAGAATAAAAAAAAGTATGAGGATTTTTGTATGACATCTAGTAGAGAGGTAATTGCCATTGTGCCTGCTGAGGAAGTAGACATTCTGAAAAAAATACTTAAGAAAGAGACTCTTTTAAGAAATGCTGCCGAAGGGGAGATAAATCATCTGAAAAATCAAATGGCAGAACTGAAAATGTCGGAGGCATCAAGAGTATCAGATATCTCAAAACTTCGTAAGATGTTGGAAGATGAGGCACATCAGAAAGAGAAACTCAAAGGAGAAATAGCAAGATTGCAAAGTCAATTATTGCAATTAGGTTTTGAAGTTGGCAAAAAAAAGTTTATCCATACAAATATTTTGTCTACAAGACAACAAAAAATTGATGGAGGTGGATTTGAAAAAGATTTTGGTGATCTACATTCTTCCACTTCCCTAGTTAAGCATGAGCAGCAAGCTTCAGTAAATGGAGAGAAGGCCTCAGTTGCCAAGTTCTTTGAACAAGGCAATAAAATCAATATTCTTGCAGGGGGACTGCAGAAGACTCTGTCATTGCTTGAAGCAGAAGATGTTGATGTGCGAATCCATGCCGTGAAAATAATAGCAAATTTAGCTTCTGAAGAAGCAATTCAGAAGAGGATTGTAGAAGCAGGTGCAGTTACGTCCTTGCTTACACTGCTTAAGAACTCACAAGATGAAACCATACATAGAGTTGCAGCAAGCGCCATAGCAAATTTGGCAATGAACGAAACCAATCAAGATCTCATTGTGGCTCAAGGAGGCATTAGTTTACTGTCAATGACGGCAGCCAATGCCGAGGATCCTCAGACCCTTCGAATGGTTGCTGGAGCAATTGCTAATCTTTGTGGCAATGATAAACTACAAATAGAGCTAAGGGAGGAAGGTGGTATCAAGGCACTGCTGGGAATGGTCAGATGTAGACATCCTGATGTACATATACAGGTTGCACGCGGAATAGCCAACTTTGCCAAGTGTGAGTCAAAAGCGTCTACACAAGGAACAAAGGTTGGAAGGTCTTTACTAATTGAGGATGGTGTGCTTCCATGGATAGTGCAAAACGCAAATAATGAAGTCTCGTTAGTTAGGCGTCATATTGAGCTTGCACTCTGTCACTTAGCACAACATGAAGCAAATGCGAGAGACATGATCAGTGGAGGAGTAATACGAGAGCTAGTTCGTATCTCGAGAGATTGTTCAAGAGAAGACATAAGGATTCTTGCACGTCGAACACTAGTCTCCATCCCCTCTTTCCAAGCTGAAATTAGACGTTTGGGGATATATTATTGA 1695 0.3982 MHLQKIVCMCRFETQLTRLLRDSFRDVDNGIKDTSNQFSSQPSSFLAMKVENMVKLKEDFDYKSLCRRLDIELDKLTMEYERQQKAFEDDIETLTKEAQHRISEAQKNYSDLLEKERLKYQKDYKESIKRLEEKVMENKKKYEDFCMTSSREVIAIVPAEEVDILKKILKKETLLRNAAEGEINHLKNQMAELKMSEASRVSDISKLRKMLEDEAHQKEKLKGEIARLQSQLLQLGFEVGKKKFIHTNILSTRQQKIDGGGFEKDFGDLHSSTSLVKHEQQASVNGEKASVAKFFEQGNKINILAGGLQKTLSLLEAEDVDVRIHAVKIIANLASEEAIQKRIVEAGAVTSLLTLLKNSQDETIHRVAASAIANLAMNETNQDLIVAQGGISLLSMTAANAEDPQTLRMVAGAIANLCGNDKLQIELREEGGIKALLGMVRCRHPDVHIQVARGIANFAKCESKASTQGTKVGRSLLIEDGVLPWIVQNANNEVSLVRRHIELALCHLAQHEANARDMISGGVIRELVRISRDCSREDIRILARRTLVSIPSFQAEIRRLGIYY 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2312g00002 564 Coils Coil 169 196 - -
Mupr2312g00002 564 Coils Coil 121 141 - -
Mupr2312g00002 564 SUPERFAMILY ARM repeat 303 550 IPR016024 -
Mupr2312g00002 564 Gene3D - 397 562 IPR011989 -
Mupr2312g00002 564 Gene3D - 294 396 IPR011989 -
Mupr2312g00002 564 Coils Coil 66 115 - -
Mupr2312g00002 564 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 347 390 IPR000225 GO:0005515
Mupr2312g00002 564 SMART arm_5 420 460 IPR000225 GO:0005515
Mupr2312g00002 564 SMART arm_5 295 335 IPR000225 GO:0005515
Mupr2312g00002 564 SMART arm_5 378 419 IPR000225 GO:0005515
Mupr2312g00002 564 SMART arm_5 336 377 IPR000225 GO:0005515
Mupr2312g00002 564 Pfam Armadillo/beta-catenin-like repeat 343 376 IPR000225 GO:0005515
Mupr2312g00002 564 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 306 348 IPR000225 GO:0005515
Mupr2312g00002 564 Coils Coil 204 238 - -
Mupr2312g00002 564 PANTHER VACUOLAR PROTEIN 8 274 558 IPR045156 GO:0043495|GO:0071562
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr2312g00002 Mupr-Chr2312 1374 7860 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr2312g00002 261 473 U-box Gene Family AT1G23030 27.074 8.89e-06 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr2312g00002 - - ccaj:109807166 788.489