Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2308g00001 ATGGCAGCTTTTTCATCCCAATACTACCATCCCTTTCTAGTTGACTCCACATGCTTCTCAATTAGTACTCCTTCCATAAACAACGTGTCTTCTTTCGGGGAGCAACCCCTTATAAACACTCCTCCTTCTCCTTATCACTTTCACAACATTCATCACGAAACTAGCTCTGTTGATCAAAGCTCCAAGGTTACCATCTGTGACACTGATCCTTCTGTGCTCAAAAACCACAGTCCTGAGACTTCCATGGTTGTGGACAAGCTTGAAAAAGGTGAACAAGTCACTCAGAACGTCATCCCCATGGAGAAGAAGAGAAGAGCAAGAAATGGATCTTCCTTGAGTAGCCCCTTATCAAAGGACTCAACAGAAGGGGGAAACAAGAAACAAAAGAAGAGCAATGGTGGGGTGAAAGGAGACAACAAGCCAAAAGAAGCGAAGGATGAGAAAAAAGGTCCTGAAGAGCTTCCAGCGGGGTATATCCACGTTAGAGCAAGAAGGGGTCAAGCAACGGATAGCCACAGCCTTGCTGAAAGGGTGAGAAGAGAGAAAATAAGTGAAAGGATGAAGACGTTGCAGCGACTTGTGCCAGGCTGTGATAAGGTAACTGGAAAGGCCCTTGTGTTGGACGAAATAATCAATTATGTTCAGTCCTTACAGAATCAAGTGGAGTTATTCAACATTGTTCATTGCTTACAATGCCTAAACCTCTGTATTCTTCTGCAGTTCTTGTCAATGAAACTTGCTTCTGTGAATCCCATGTTGTTTGACTTGGCAATGGACATAGACACCCTCTTGGTTAGACCCGATATGAAATTAAATAATATAGCTTCACCATCATCACTACCATGTGTACCACAATGCAGACCCGACCAGGCCATAGCTTTTGCTGACACAACCACCAATACCAGCACCTTCCCCATTGCTAATAATGACTATCTTTTGGATCATTCATCTTCACTTTTTCTTCAAGGGCAGAGGCCAAATGTCTTCTTCGAGTATACCGGTGGTCAATTTTGGGACGTAGAAGACCAACGACAAAGGTTTCTTCATCCATATGGATTCAGCAATAATTCGGGTTCTTTCAATTAG 1086 0.4328 MAAFSSQYYHPFLVDSTCFSISTPSINNVSSFGEQPLINTPPSPYHFHNIHHETSSVDQSSKVTICDTDPSVLKNHSPETSMVVDKLEKGEQVTQNVIPMEKKRRARNGSSLSSPLSKDSTEGGNKKQKKSNGGVKGDNKPKEAKDEKKGPEELPAGYIHVRARRGQATDSHSLAERVRREKISERMKTLQRLVPGCDKVTGKALVLDEIINYVQSLQNQVELFNIVHCLQCLNLCILLQFLSMKLASVNPMLFDLAMDIDTLLVRPDMKLNNIASPSSLPCVPQCRPDQAIAFADTTTNTSTFPIANNDYLLDHSSSLFLQGQRPNVFFEYTGGQFWDVEDQRQRFLHPYGFSNNSGSFN 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2308g00001 361 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 167 217 IPR011598 GO:0046983
Mupr2308g00001 361 SMART finulus 173 223 IPR011598 GO:0046983
Mupr2308g00001 361 MobiDBLite consensus disorder prediction 69 175 - -
Mupr2308g00001 361 Pfam Helix-loop-helix DNA-binding domain 171 218 IPR011598 GO:0046983
Mupr2308g00001 361 CDD bHLH_AtBPE_like 157 260 - -
Mupr2308g00001 361 Gene3D - 164 230 IPR036638 GO:0046983
Mupr2308g00001 361 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 74 282 IPR024097 GO:0006355
Mupr2308g00001 361 MobiDBLite consensus disorder prediction 122 175 - -
Mupr2308g00001 361 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 165 225 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr2308g00001 Mupr-Chr2308 16556 19021 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr2308g00001 126 284 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G50915 52.121 5.83e-49 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mupr2308g00001 HLH 3.5e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr2308g00001 - - pvu:PHAVU_002G283100g 481.1