Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2307g00001 ATGGAGCAACCGCCTCAACCACAGCCGGAGACAGCGGGGAGCGGTTCTAGGGATTTGGAGGAGTCGCGACTGGTCGGAGTCCCCGTCGCGCTAGCTCGCGACGCAGACGTGGCGGAAAGAGACGGTGGTTATTGCGCCTCCAATTTGGAGGTGACCGTCGTGGACGGTGCCGTTTTGAAACGGAAGCGCGGTCGTCCGGCCAAGGGAGCTCCGAAAGTGGCTCCTCTGGTGAGGCAGAAGAAGGACGAGGAGGACGTTTGTTTCATTTGCTTCGACGGTGGGAGCCTCGTTCTTTGCGATCGCCGGGGTTGTCCTAAAGCGTATCATCCCGCCTGTATTAAGCGAGACGAAGCGTTCTTCCGATCAAAGGCCAAGTGGAATTGCGGTTGGCATATATGTAGCGTTTGTCAGAAGGCATCACATTATATGTGCTATACTTGCACATACTCTTTGTGCAAGGGATGCACAAGAGATGCTGATTTTGTTTTTGTCAGAGAGAATAAAGGTTTGTGCGGAATATGCATGAGGACTATAATGCTGATTGAGAACAGTGCTCAGGGTAATAAGGAAATGTGTGAAGTGGATTTTGATGACAAAAGCAGCTGGGAGTATCTTTTCAAGGTGTATTGGATGTATTTGAAGGGGAAGCTATCTTTAACTTTTGATGAGCTCCTTCGAGCTAAAAACACAGGGAAAGGTGCTGCTCCTATGAGTTATAAGGTTCAAAGTCCCCATGAACTTTATCATCTTAGAGATGACAAAGGTTCTGGTTCTGAGAACTCCTGTATAGACATAGAATCAAATAATTTGAAGAACAAGAAGCCCAAGAGACAGCCAAAGCTTCTTGGTAAAGGTGATTGCTTGGATAGGGTAACTTCAGGTGGTGACAATGGTGTGTCTTTGCCTGAATACACAAAATGGGCATCAAAGGAGCTTCTAGAGTTTGTTGCACATATGAAAAATGGTGATACATCTCTCCTGTCTCAATTTGATGTCGAGAACCTCTTGCTGGAGTATGTAAAGAAAAATGATCTTCGTGATCCTCAACAGAAGTCCCAAGTTGTTTGCGACTCTAGACTATTAAATTTGTTTGGAAAAGCACGTGTTGGCCACATTGAAATGCTAAAGCTCCTTGAATCCCACTTTCTTTTAAAAGACAATGGCCCTGCAGAAAATACTTTTGGAGCAGGAATTATTAATGCTGTTGCTAGTGAAGGGGAGGCCATTGACAATTACAATAAACAGTCGATGTTAGTTAATGACAAGAGATGTAAAACACCTAAAAAGGTTGATGTTCTAGTGCCACAAAATAATCCAGATGCATATGCTGCAATAGATGCTCACAACATTAACTTGATCTACTTGCGGCGAAGTCTGATGGAGAATCTAACTGAAGATATTGAAAAGACTCATGAGAAGGTTGTTGGTTCATTTGTGCGGATAAGAATCTCTAGCAGTGATCAAAAGCATGATATGTATAGGCTTGTCCAAGTTGTAGGTACAAGCAAGGTTTCTGAACCTTACAAAATTGGCACAAGAACAACTGATATCAAGCTTGAAATTTTAAACTTAAACAGGAAGGAGGTTATATCAATTGCTGAAATTTCTAATCAGGAGTTCTCTGAGGATGAATGCAAGCGGTTGCGTCAGAGTATAAAATATGGGCTCTCAAAGAGATTGACTGTGGGAGAGATTCTGGACAAAGCATTGACACTTCAAGCAATTAGAGTTAATGATTTGCTGGAAGCTGAGATATTGCGGCTTAATCATCTTCGTGATAGAGCAAGTGAAAAGGGGCATAGAAAAGAATATCCTTTACCATTTACTACTTTACTCTGCGGTCTACTAATCTCTCCGGAGGAACGCCAACGCAGGCTGCATGAAATTCCAGATGTACACTCTGATCCCAATTTGGATTCAATGTTTGAGTCTGATGAAGATGATGGAGAGTCAGATGAAAGGAAGCAAGATAGCAATATATTTTCAAAATATCTTGGGTTTGATAGAAGAGAGAGGGGTTCTCTTTTTCCAAGAATTTCAAATGGTATTGTCAATGACATGGGAGGCAAAATGCAAGACTTGCCTGCTACCCGTGAACTGGTTGGTAATATATGCACAGTGAAGAATCAGATCAACCGTGATGATACTGCTATTGGTGATATCACTAATGCAGTTGTGAAATCAGAAGTACCTAGTGTTACAGTGGACATTTCATCATCGCTTCACTCTACTGGGATGGAGCAGCCATTTGATGAGTCTTTGAAAGATAGCTTATGGCATTATCAGGATCCATCTGGGAAGATTCAAGGACCTTTTTCTATGATTCAGCTGTACAAGTGGAATGCAAGTGGAGGTTTCCCTCCGGATCTCAGAATATGGAGGATAGATGAGAAACAGGATAACTCTATATTGTTAATTGATGCACTAAGTGGGAAGTGTCCCAAAAACGTGTCATTGCCATTCACCAGCAAATTGCTCTCTCTTGGGGTCAGTGTTACATTGGATAATAAAGATAATAGTCAGGAAGCTGGGAAGAATGCAGCAAAGAATGAAATTTCTGCAGATGGCCAAATTATTGAACAGAGCAAGGAACAAAAGGTGGATAATACCTCTACCCAGTCTGATGGTAAAGATGAATCTGTTAGGAGCAATGGATGGCATGGCCAGCTGAATGTATACCCTTCACTACTGTCAATTGCCTGTCCTGAGAAATTGAATGAGAATTCTTCTGATAAATTAAGGAAAGGTCATGAGGTTGTGGGAAACTCCAAAGATAATGGAAATAATGGCTCGAACAGGACATCTGATGGGCAGAGTAATAGTGGGCAGAATTATCAGAAGCAATCAGATAGTGAAGAGAATTCTGGGCAGTCTTCTGGACAGACCTGGAGACACCCTAATGTAAATACTTCTTCCAATTGCTTGGTTACCACATCAGCTCAGGTTTCTGGTACAACCACATTAGCTGAGGTTTCTGGTACAAAAACATCACCACATAAGCTGGGATTTGATTTGCACAATCCTCCTTCCCCTCCAACATGTAATGCATCTTCTGGACAGACCTGGAGACACCCTAATGTAAATAGTTCTTCCAATTGCTTGGTTACCACATCAGATCATGTTTCTGGTACAAAAACATCACCACATAAGCTGGGATTTGATTTGCATAATCCTCCTTCCCCTCCAGCATGTAATACATCTTCTGGACAGACCTGGAGACACCCTGATATAAATAGTTCTTCCAATTGCTTGGTTACCACATCAGCTCATGTTTCTGGTACAAAAACATCTCCACATAAACTGGGATTTGATTTGCATAATCCTCCTTCCCCTCCAGCATGTAATACATCTACATGGCAGGCAATCATTGGTGAGCCCAATGATTTTGATGAATCAGTTTCAGATCTGTTGGCAGAAGTGGAAGCAATGGAAACATTTGGTTTGGAATCTCCCACTTCAATCATGAAATGTGGTGAGGATTTGACTGAAGGTTCTAAAAATGATTGTCTCAGTTTTGTTGCAGAGCTTAGCCCAATGCTTGATGCGGGTAAAGGTGATGCACTGAGCTCCACAGGTGATTTAAACTTGCCATCTCAATCGACAGCAGCAGAGGAATCGTTACAGCAAGCAGAGGTACATCACCACCATCATCAAAGAATTTCTGCAGAGCATTCTTCAAGAAATTCTAAAGTTGAGGTGGGTACAAAGAACGTTAGCGTTTCAGGTAATCAATGGGATTCAGGCTCAGAAAATTCAACCATTGTTCCATCCCCTGCAACCTTGGGCCTGGCTATAGACACCACTTGGAGACTTGGATTAGAGAATACACACATGGGATGGAGTGGAATTGATCAAGGAAATGCAAATGCGGGTTGGGGAGTAGGACAGACAGCAGTGCAGGAAAACAGGAGCTCAAATTCATACACTTCTGTGGCAACTCCAGGCTTTGGGGATAGCCAAACAAGATATGGCAGCGATCGATTTTCTGTGCCCAGAGATCGGGGTTTTCAAGGTCATGGTAGGGAATCAGGTTTTAGTAGAAGCAGAATTGCAAATAACAGGCAACCGGTATATGGTGTTGGAAATGGAGGCTCATATAGGCCTCTGCCCAAAGGGCAGCGAGTTTGTAAATTTTATGAAAGTGGGTACTGTAAGAAGGGAGCATCCTGTGATTACTGGCACCCATGA 4188 0.4284 MEQPPQPQPETAGSGSRDLEESRLVGVPVALARDADVAERDGGYCASNLEVTVVDGAVLKRKRGRPAKGAPKVAPLVRQKKDEEDVCFICFDGGSLVLCDRRGCPKAYHPACIKRDEAFFRSKAKWNCGWHICSVCQKASHYMCYTCTYSLCKGCTRDADFVFVRENKGLCGICMRTIMLIENSAQGNKEMCEVDFDDKSSWEYLFKVYWMYLKGKLSLTFDELLRAKNTGKGAAPMSYKVQSPHELYHLRDDKGSGSENSCIDIESNNLKNKKPKRQPKLLGKGDCLDRVTSGGDNGVSLPEYTKWASKELLEFVAHMKNGDTSLLSQFDVENLLLEYVKKNDLRDPQQKSQVVCDSRLLNLFGKARVGHIEMLKLLESHFLLKDNGPAENTFGAGIINAVASEGEAIDNYNKQSMLVNDKRCKTPKKVDVLVPQNNPDAYAAIDAHNINLIYLRRSLMENLTEDIEKTHEKVVGSFVRIRISSSDQKHDMYRLVQVVGTSKVSEPYKIGTRTTDIKLEILNLNRKEVISIAEISNQEFSEDECKRLRQSIKYGLSKRLTVGEILDKALTLQAIRVNDLLEAEILRLNHLRDRASEKGHRKEYPLPFTTLLCGLLISPEERQRRLHEIPDVHSDPNLDSMFESDEDDGESDERKQDSNIFSKYLGFDRRERGSLFPRISNGIVNDMGGKMQDLPATRELVGNICTVKNQINRDDTAIGDITNAVVKSEVPSVTVDISSSLHSTGMEQPFDESLKDSLWHYQDPSGKIQGPFSMIQLYKWNASGGFPPDLRIWRIDEKQDNSILLIDALSGKCPKNVSLPFTSKLLSLGVSVTLDNKDNSQEAGKNAAKNEISADGQIIEQSKEQKVDNTSTQSDGKDESVRSNGWHGQLNVYPSLLSIACPEKLNENSSDKLRKGHEVVGNSKDNGNNGSNRTSDGQSNSGQNYQKQSDSEENSGQSSGQTWRHPNVNTSSNCLVTTSAQVSGTTTLAEVSGTKTSPHKLGFDLHNPPSPPTCNASSGQTWRHPNVNSSSNCLVTTSDHVSGTKTSPHKLGFDLHNPPSPPACNTSSGQTWRHPDINSSSNCLVTTSAHVSGTKTSPHKLGFDLHNPPSPPACNTSTWQAIIGEPNDFDESVSDLLAEVEAMETFGLESPTSIMKCGEDLTEGSKNDCLSFVAELSPMLDAGKGDALSSTGDLNLPSQSTAAEESLQQAEVHHHHHQRISAEHSSRNSKVEVGTKNVSVSGNQWDSGSENSTIVPSPATLGLAIDTTWRLGLENTHMGWSGIDQGNANAGWGVGQTAVQENRSSNSYTSVATPGFGDSQTRYGSDRFSVPRDRGFQGHGRESGFSRSRIANNRQPVYGVGNGGSYRPLPKGQRVCKFYESGYCKKGASCDYWHP 1395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2307g00001 1395 Gene3D - 758 816 IPR035445 -
Mupr2307g00001 1395 ProSiteProfiles Zinc finger C3H1-type profile. 1370 1395 IPR000571 GO:0046872
Mupr2307g00001 1395 MobiDBLite consensus disorder prediction 1 15 - -
Mupr2307g00001 1395 MobiDBLite consensus disorder prediction 908 972 - -
Mupr2307g00001 1395 SUPERFAMILY Plus3-like 445 573 IPR036128 GO:0003677
Mupr2307g00001 1395 Gene3D SWIB/MDM2 domain 299 389 IPR036885 -
Mupr2307g00001 1395 MobiDBLite consensus disorder prediction 1208 1230 - -
Mupr2307g00001 1395 MobiDBLite consensus disorder prediction 1010 1029 - -
Mupr2307g00001 1395 Pfam GYF domain 759 800 IPR003169 GO:0005515
Mupr2307g00001 1395 SMART swib_2 304 387 IPR019835 -
Mupr2307g00001 1395 CDD PHD5_NSD 86 131 - -
Mupr2307g00001 1395 SMART gyf_5 757 812 IPR003169 GO:0005515
Mupr2307g00001 1395 SUPERFAMILY CCCH zinc finger 1370 1394 IPR036855 GO:0046872
Mupr2307g00001 1395 SUPERFAMILY FYVE/PHD zinc finger 68 131 IPR011011 -
Mupr2307g00001 1395 Gene3D - 445 574 IPR036128 GO:0003677
Mupr2307g00001 1395 ProSiteProfiles SWIB/MDM2 domain profile. 301 384 IPR003121 -
Mupr2307g00001 1395 MobiDBLite consensus disorder prediction 250 280 - -
Mupr2307g00001 1395 MobiDBLite consensus disorder prediction 855 869 - -
Mupr2307g00001 1395 MobiDBLite consensus disorder prediction 628 656 - -
Mupr2307g00001 1395 CDD GYF 756 811 IPR003169 GO:0005515
Mupr2307g00001 1395 MobiDBLite consensus disorder prediction 986 1029 - -
Mupr2307g00001 1395 MobiDBLite consensus disorder prediction 1191 1207 - -
Mupr2307g00001 1395 MobiDBLite consensus disorder prediction 839 886 - -
Mupr2307g00001 1395 MobiDBLite consensus disorder prediction 1304 1323 - -
Mupr2307g00001 1395 MobiDBLite consensus disorder prediction 1184 1233 - -
Mupr2307g00001 1395 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 44-RELATED 49 1395 - -
Mupr2307g00001 1395 SMART rtf1 444 554 IPR004343 GO:0003677
Mupr2307g00001 1395 ProSiteProfiles Plus3 domain profile. 444 577 IPR004343 GO:0003677
Mupr2307g00001 1395 SUPERFAMILY GYF domain 753 809 IPR035445 -
Mupr2307g00001 1395 FunFam Zinc finger CCCH domain-containing protein 19 76 176 - -
Mupr2307g00001 1395 MobiDBLite consensus disorder prediction 1 21 - -
Mupr2307g00001 1395 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 79 175 IPR013083 -
Mupr2307g00001 1395 Pfam Plus-3 domain 449 552 IPR004343 GO:0003677
Mupr2307g00001 1395 Coils Coil 578 598 - -
Mupr2307g00001 1395 SMART PHD_3 86 132 IPR001965 -
Mupr2307g00001 1395 MobiDBLite consensus disorder prediction 1328 1348 - -
Mupr2307g00001 1395 SUPERFAMILY SWIB/MDM2 domain 305 383 IPR036885 -
Mupr2307g00001 1395 CDD SWIB-MDM2_like 307 382 - -
Mupr2307g00001 1395 ProSiteProfiles GYF domain profile. 756 810 IPR003169 GO:0005515
Mupr2307g00001 1395 ProSitePatterns Zinc finger PHD-type signature. 87 147 IPR019786 -
Mupr2307g00001 1395 ProSiteProfiles Zinc finger PHD-type profile. 84 150 IPR019787 -
Mupr2307g00001 1395 Pfam SWIB/MDM2 domain 309 382 IPR003121 -
Mupr2307g00001 1395 MobiDBLite consensus disorder prediction 922 972 - -
Mupr2307g00001 1395 FunFam Zinc finger CCCH domain-containing protein 19 445 574 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr2307g00001 Mupr-Chr2307 7030 13230 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr2307g00001 84 157 PHD Transcription Factor Family AT4G14920 35.135 6.96e-06 48.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SWI/SNF-BAF60b Mupr2307g00001 Plus-3 1e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr2307g00001 - - gmx:100801151 2410.56