Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2287g00004 ATGGATCCTGTAGCAGCACAAGGACGTCCTCTCCCTCCACCTTTTCTCACTAGAGATCTTCACTTACACCCTCACCACCAATTCCAACCCCACCACAACCACCACAACTCCGAGGACGAAGCCGGCAATGGCCGCGGCCAGAAGCGAGATCGCGAAGACAACGGTGGTGGTGGAAGCGGCAACGGTGCCACCACACCGCCCCACGCCGCCGGAGAAGGCCAAGAACACGGGTCAGGGGAAGGAGGTGGAAGTGAAATGTCGAGAAGACCAAGGGGAAGACCCGCAGGGTCCAAAAACAAGCCAAAACCACCCATTATCATCACAAGAGACAGTGCCAACGCTCTCCGATCCCATGTCATGGAAATCGCCAACGGCTGCGACATCATGGAGAGCGTCACCGCCTTCGCAAGGCGGCGACAGCGCGGAGTCTGCGTGCTCAGCGGCAGCGGCACCGTCACCAACGTCACGCTCCGCCAGCCGGCTTCGCCCGGCGCCGTCGTGACCCTTCATGGAAGGTTCGAGATTTTATCCCTGTCCGGTTCATTCCTGCCGCCGCCGGCTCCGCCGGCAGCATCAGGACTGGCCATATACCTGGCAGGCGGACAGGGACAGGTGGTAGGTGGAAGCGTGGTGGGACCTCTTGTGGCCTCAGGTCCTGTTGTTATCATGGCTGCTTCATTTGGTAATGCTGCTTATGAGAGACTACCCTTAGAGGAAGAAGAAACTCCGGTAACAGTTCCCGGTACCGGAGGATTAGGATCCCCAGGAATCCCGGGGAACCAACAACAACCACAGTCGTTGCAGCCACAACAGCTTGTGGGAGATCCTAATAGTTCTTCTCTCTTCCATGGTGTGCCTCAGAATCTTCTCAATTCCTGTCAATTACCGGCTGAGGCCTTTGATCATGTTGAGTTGAAGAAGGATGTACAAATTCATGAATCTTCGTTGCTTCAAGACGAAGCAGCAGAAACAACTACAGCATGTGCACTTAATTTCTCTCTCTCTCTCCATGACTCCGAACCTAGATTCAGATTCTAA 1038 0.5539 MDPVAAQGRPLPPPFLTRDLHLHPHHQFQPHHNHHNSEDEAGNGRGQKRDREDNGGGGSGNGATTPPHAAGEGQEHGSGEGGGSEMSRRPRGRPAGSKNKPKPPIIITRDSANALRSHVMEIANGCDIMESVTAFARRRQRGVCVLSGSGTVTNVTLRQPASPGAVVTLHGRFEILSLSGSFLPPPAPPAASGLAIYLAGGQGQVVGGSVVGPLVASGPVVIMAASFGNAAYERLPLEEEETPVTVPGTGGLGSPGIPGNQQQPQSLQPQQLVGDPNSSSLFHGVPQNLLNSCQLPAEAFDHVELKKDVQIHESSLLQDEAAETTTACALNFSLSLHDSEPRFRF 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2287g00004 345 ProSiteProfiles PPC domain profile profile. 112 248 IPR005175 -
Mupr2287g00004 345 MobiDBLite consensus disorder prediction 19 55 - -
Mupr2287g00004 345 MobiDBLite consensus disorder prediction 1 106 - -
Mupr2287g00004 345 MobiDBLite consensus disorder prediction 255 278 - -
Mupr2287g00004 345 Pfam Plants and Prokaryotes Conserved (PCC) domain 116 228 IPR005175 -
Mupr2287g00004 345 FunFam AT-hook motif nuclear-localized protein 115 242 - -
Mupr2287g00004 345 CDD DUF296 116 183 IPR005175 -
Mupr2287g00004 345 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 38 276 IPR014476 GO:0003680
Mupr2287g00004 345 SUPERFAMILY AF0104/ALDC/Ptd012-like 112 247 - -
Mupr2287g00004 345 MobiDBLite consensus disorder prediction 240 278 - -
Mupr2287g00004 345 Gene3D - 115 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr2287g00004 Mupr-Chr2287 39519 40957 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr2287g00004 1 300 AT-hook Motif Nuclear Localized (AHL) Family AT2G45430 61.682 2.44e-84 256
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr2287g00004 - - gmx:100816243 400.208