Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2280g00001 ATGGAAGCTACCACCTGCAATGATAACTCTAATGCTGCAGTTTCACATTCTTCTCCAATGATGTCGTTTAATGGGAAACGACTATTCGTGGATGAGATGGATTTCTTTGCGGAGAATAAGGAGAAGAAGAAAAGTGCAGTTGATGATCAAATGGTGCAACAAATGGAGCATCATTTGGATACAAATTTAGATCTCTTCATAACGAGTTCCCCTAGCAATAGATCAACTAGGGAAGAAGGAACATCGGATGCAAGGGATAATAAGAGAAATAAGATTAATGGAGCCATAGAGGAGAAGGGTGAGAAAATTTGCACTACTAGAGATGTTGTTGAGTTGGACAGTGCAAAATCCAGAAGAGATCAGCACGAAAGTCAATCTGACAAAGCTATTCCGGGGTGGCTCTCAAACGAAGTCACGAGATTGAGTTCTTTAAAGGATGTTGATCAAGCATCAGAAACCATGTCAATGATCAAGAAAGCTCGCGTATTAGTTCGAGCAAGATCAGAGTCTTCTACGATTTCTGATGGATGTCAATGGAGAAAGTATGGACAGAAGAGGGCAAAAGGGAATCCATGTCCGCGAGCTTATTATCGTTGCTCAATGAGTAATGGTTGTCCAGTTCGGAAGCAGGTACAAAGGTGTGCTGAAGATCAAAGTGTGTTGATGACAACATATGAAGGGCAGCACAATCATATACTACCTCCAACTGCCAAGGCAATGGCATCCACCACATCTGCAGCTGCATCAATGCTTCTTTCAGGATCAATGCCAAGCTCAGATGGCTTTATACACCCAAACATACTAGAAAGTGCATCACTTCCATTCTCACAGAACTTAGCAACCCTTTCAACTTCAGCTCCATTTCCAACTATCACTTTGGATCTCACTCAAAGTGCTACCAGTAATTGCTCACAGTTACTGCAAGGGGCACCACAGGATAACCAACATAGCCTCATTTCCGCACTTTTGCCTCAGAGGTTTATGCCAGCTCCAAACATTTTTGACCAAACTAAGCTTTCTATCTTACATGGATTTCAGGGAACGGAGACAACTTCATTTGTTGACAGTGTAAATGCAGCAACAACTGCTATCACTGCGGACCCGAAATTCAGTGCAGCTCTTATGGCTGCCATAACATCTATTATTGGAAGTTCAAATCCATATAATAATGGTACAAGTGGAGATCCAGCATTGCAATGA 1200 0.4208 MEATTCNDNSNAAVSHSSPMMSFNGKRLFVDEMDFFAENKEKKKSAVDDQMVQQMEHHLDTNLDLFITSSPSNRSTREEGTSDARDNKRNKINGAIEEKGEKICTTRDVVELDSAKSRRDQHESQSDKAIPGWLSNEVTRLSSLKDVDQASETMSMIKKARVLVRARSESSTISDGCQWRKYGQKRAKGNPCPRAYYRCSMSNGCPVRKQVQRCAEDQSVLMTTYEGQHNHILPPTAKAMASTTSAAASMLLSGSMPSSDGFIHPNILESASLPFSQNLATLSTSAPFPTITLDLTQSATSNCSQLLQGAPQDNQHSLISALLPQRFMPAPNIFDQTKLSILHGFQGTETTSFVDSVNAATTAITADPKFSAALMAAITSIIGSSNPYNNGTSGDPALQ 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2280g00001 399 ProSiteProfiles WRKY domain profile. 168 234 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mupr2280g00001 399 Pfam WRKY DNA -binding domain 175 231 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mupr2280g00001 399 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 46 391 IPR044810 GO:0003700
Mupr2280g00001 399 SMART WRKY_cls 173 233 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mupr2280g00001 399 MobiDBLite consensus disorder prediction 66 94 - -
Mupr2280g00001 399 MobiDBLite consensus disorder prediction 78 94 - -
Mupr2280g00001 399 Gene3D WRKY domain 158 235 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mupr2280g00001 399 FunFam probable WRKY transcription factor 31 158 235 - -
Mupr2280g00001 399 SUPERFAMILY WRKY DNA-binding domain 166 234 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr2280g00001 Mupr-Chr2280 275 2757 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr2280g00001 142 382 WRKY Transcription Factor Family AT4G04450 56.098 1.94e-77 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mupr2280g00001 WRKY 4.2e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr2280g00001 - - gmx:100779533 459.914