Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2277g00001 ATGGCAAAGAGGAAGAGCTGGTTTGGATGGGTGAAAAGGCTATTCACTTCTGAGTCAAAGGACAACAAAAAGCCAAACAAATGGGGGTGGAGTTTTGGAAGGATTAAGCAGAAACAGTTTCCTACAATAACAGCTCCAAATAGGACATTGATTGAAGCAAGTGCAGAGCAGAGAAAGCATGCTCTAACTGTGGCCATTGCAACAGCAGCAGCTGCTGAGGCTGCAGTTGCTGCTGCACATGCTGCTGCTGAGGTTGTCAAGCTCACAGGTGCTTCTTGCTCTTACTCATATCTTTCCAAGGGAGACAGAAGTTTAGCTGCCATCAAGATTCAAAGCGCATATCGAGCACATCTGGCTAGGAAAGCACTAAGAGCATTGAAGGGAGTTATAAGATTGCAAGCAATAATTCGCGGTCAAGCTGTGAGAGGTCAAGTGTCAAACACTCTGCAGAATTTTCCCTCCAATGCAAGAAATCAGGTGGAAATTCAGGAAAGAAGCAGCCATACTGCTGAACAGATTAAGCAAAGTCCGAAGCAAAAGAAAAAGTTAGAAGCGAAGGAACTGAAGTCTGAATGCCATAGTCAAAGAACATGGGACTATAGCTCGCTCTCAAGAGAAGACATTGAAGCCATATGGTTAAGAAAACAAGAGGCCATGGTCAAAAGAGAGCGCATGAAACAGTACTCTTCTTCACAGAGGGAGAGAAAAAATCAACAAATGGTGGAAGAATCTGTACACAACATGAACTTCAGAAGAGAGAGCTGTCGTACACTTGGAGAGTGGCTACAAAAAGAAACATGTGACTGGGATGTGCTTTATAAACCAACTCTTCCTTCAAACTTTATGACAATAAAAAATGAATTACAAGAAGGGTTGAGTCCACGAATTTCAGTCCCAAGGAAATCATTTTCTCTTGTAAAAAGAAGTTCAAATGAGGATGAGAGTTTCTTGTCAAATTCTCCAGTTTTTCCCACTTACATGGCTGTTACTGAATCCAGCAAAGCAAAGATGAGGTCTATTAGCACACCAAAGCAAAGAACAGGAATTCTGGATATATGCACCAATCAGAATGAGACTCACAAGGAAGGCATTTCCTTTGCCTCTTCTTATTATGGTGCAACTAGTAGCACCAATGAAAACAATGCAGAATCCGGTTCAATGCTTGATTTGCTGAAGTCATCAGAAACTATGCGCATCAAACTATGCTTAATAGACTATGCACATCAGACTATGCATATCAGACGATACATAACAAATCATGCGTATCAAACACATCTAACAGAGGATGTGTATCAAACGTAA 1302 0.414 MAKRKSWFGWVKRLFTSESKDNKKPNKWGWSFGRIKQKQFPTITAPNRTLIEASAEQRKHALTVAIATAAAAEAAVAAAHAAAEVVKLTGASCSYSYLSKGDRSLAAIKIQSAYRAHLARKALRALKGVIRLQAIIRGQAVRGQVSNTLQNFPSNARNQVEIQERSSHTAEQIKQSPKQKKKLEAKELKSECHSQRTWDYSSLSREDIEAIWLRKQEAMVKRERMKQYSSSQRERKNQQMVEESVHNMNFRRESCRTLGEWLQKETCDWDVLYKPTLPSNFMTIKNELQEGLSPRISVPRKSFSLVKRSSNEDESFLSNSPVFPTYMAVTESSKAKMRSISTPKQRTGILDICTNQNETHKEGISFASSYYGATSSTNENNAESGSMLDLLKSSETMRIKLCLIDYAHQTMHIRRYITNHAYQTHLTEDVYQT 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2277g00001 433 ProSiteProfiles IQ motif profile. 103 131 IPR000048 GO:0005515
Mupr2277g00001 433 SMART iq_5 102 124 IPR000048 GO:0005515
Mupr2277g00001 433 MobiDBLite consensus disorder prediction 174 188 - -
Mupr2277g00001 433 Pfam Protein of unknown function (DUF4005) 308 372 IPR025064 -
Mupr2277g00001 433 MobiDBLite consensus disorder prediction 150 188 - -
Mupr2277g00001 433 Gene3D - 97 151 - -
Mupr2277g00001 433 MobiDBLite consensus disorder prediction 150 173 - -
Mupr2277g00001 433 ProSiteProfiles IQ motif profile. 127 154 IPR000048 GO:0005515
Mupr2277g00001 433 PANTHER IQ-DOMAIN 5-RELATED 4 368 - -
Mupr2277g00001 433 Pfam IQ calmodulin-binding motif 106 124 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr2277g00001 Mupr-Chr2277 5092 8469 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr2277g00001 1 387 IQD Protein Family AT5G03960 43.921 2.21e-75 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr2277g00001 - - gmx:100800767 583.178