Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2273g00001 TCCACGAACATAATCATCCATGGCATTCGAGTTCATAATTGCAAACCTCAAGCCCCTGGGATTGTAATGGGGCCCGAAGGAAAGGTGATTCCTTTAGGCCATGTAGATGGGGATGCAATAAGATTGATTACTGCTTCAAAGATTTGGATTGATCATAATACGCTTTATGATTGTCAAGATGGTTTGCTTGATGTAACGCGGGGTTCTACTAATGTGACTATATCCAATAACTGGTTTAGAAATCAAGACAAGGTCATGCTTCTTGGACATGATGATGGATATGTGAGAGATCAGAACATGAAGGTTACTGTTGTGTACAACCATTTTGGACCTAAATGCAATCAACGCATGCCAAGGATTCGCCATGGATATGCACATGTAGCCAACAATCTTTACCAGGGATGGGTTCAATATGCCATCGGTGGAAGCATGGAACCTAGCCTCAAAAGTGAAGCTAACCTTTTCATAGCACCAACGACGGGGAGTAAGGAGGTAACATGGAGAAAGAATAGTCATACAAATGGAGATAGATGGGAATTTCATTCAGTAAGGGATGCTTTTGAAAATGGAGCCTCCTTCGCGATAACAAAAGGAGGACATGTAGAGAAGATAATATCCAATTAA 624 0.4135 STNIIIHGIRVHNCKPQAPGIVMGPEGKVIPLGHVDGDAIRLITASKIWIDHNTLYDCQDGLLDVTRGSTNVTISNNWFRNQDKVMLLGHDDGYVRDQNMKVTVVYNHFGPKCNQRMPRIRHGYAHVANNLYQGWVQYAIGGSMEPSLKSEANLFIAPTTGSKEVTWRKNSHTNGDRWEFHSVRDAFENGASFAITKGGHVEKIISN 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2273g00001 207 Gene3D - 1 207 IPR012334 -
Mupr2273g00001 207 PRINTS Pollen allergen Amb family signature 36 57 IPR018082 -
Mupr2273g00001 207 PRINTS Pollen allergen Amb family signature 178 202 IPR018082 -
Mupr2273g00001 207 PRINTS Pollen allergen Amb family signature 138 157 IPR018082 -
Mupr2273g00001 207 PRINTS Pollen allergen Amb family signature 116 135 IPR018082 -
Mupr2273g00001 207 SMART amb_all 1 161 IPR002022 -
Mupr2273g00001 207 SUPERFAMILY Pectin lyase-like 2 193 IPR011050 -
Mupr2273g00001 207 PANTHER PECTATE LYASE 18-RELATED 2 198 IPR045032 GO:0030570
Mupr2273g00001 207 Pfam Pectate lyase 2 155 IPR002022 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr2273g00001 Mupr-Chr2273 112 1137 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr2273g00001 1 165 Polysaccharide Lyase AT5G09280 75.152 3.93e-99 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr2273g00001 K01728 - gmx:100780437 396.741