Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2271g00003 ATGTCACAGAATTCTGAGGAGATAAAGACAGTTGAGCAGTGGAGATGGTCTGAAATGCAAGGCCTTGAGCTTGTGTCCTCTTCTGCTCCCATTTCTGACTCACATGAATCCAACGCAACAATATTGGGAGAAGAAAAAGAGGCGAAGAAAGATGGTGCTTCTAATGGTACTTGTGGTGGTGGAAGTGGGAAGAAGAAGGGTGAGAGTGTTTCCTCTGTTGGGTTTGGTGAGCTTTTCAGATTTGCTGATGGGTTGGATTACATACTAATGGCAGTTGGAACGGTTGGAGCATTTGTACATGGCTGCTCCTTGCCACTCTTTCTTCGCTTCTTCGCTGATCTCGTGAATTCCTTTGGTTCCAATGCGAATAACGTGGACAAGATGACACAGGAAGTGGTGAAGTATGCATTTTACTTCCTCGTGGTGGGGGCTGCCATATGGGCATCCTCGTGGGCAGAGATTTCGTGCTGGATGTGGACAGGTGAGAGGCAATCAACGAGGATGAGGATCAGGTATCTTGAGGCAGCGTTGGAGCAGGACATTCAATTCTTTGACACCGAGGTTCGAACATCCGATGTTGTTTTTGCCATTAACACTGATGCTGTCATGGTACAAGATGCCATTAGCGAGAAGTTGGGTAATTTCATTCACTACATGGCTACATTTGTATCTGGCTTTGTTGTGGGTTTCACTGCGGTTTGGCAATTGGCACTGGTGACCCTCGCTGTAGTTCCTATGATAGCTGTAATCGGAGGCATTCACACCACCACATTGGCCAAGTTATCTAGTAAAAGCCAGGAGGCTCTTTCTCAAGCTGGTAACATTGTGGAACAGACTGTTGTTCAAATTCGAGTGGTGTTGGCGTTTGTTGGGGAGACTAGAGCACTGCAGGGATATTCGTCTGCCTTGAGAATTGCACAGAAGATTGGCTACAGGACTGGATTTGCAAAGGGAATGGGATTGGGGGCCACTTATTTTGTTGTTTTCTGTTGCTATGCTCTTTTGCTTTGGTATGGAGGCTATTTGGTTAGACATCACTACACCAATGGAGGACTTGCCATTGCCACCATGTTTTCAGTCATGATTGGTGGATTGGCTTTAGGCCAGTCTGCACCCAGCATGGCTGCATTTACAAAGGCCAGAGTTGCTGCTGCAAAGATTTTTCGTGTGATTGATCACAAGCCGGGTATAGACAGAAAGAGTGAAGCAGGTTTGGAGTTAGAGAGTGTCACAGGACTAGTAGAGCTGAGAAATGTGGACTTTTCATACCCCTCAAGACCAGAGGTTCCGATCCTTAACAATTTCTCCTTGAGTGTGCCTGATGGCAAGACCATTGCTTTGGTAGGGAGCAGTGGCTCGGGCAAGAGCACAGTTGTGTCCCTCATTGAGAGATTCTATGATCCTTCTTCAGGACAAGTATTGCTAGATGGGCATGATGTGAAGACATTGAAGCTTAGATGGTTGAGACAGCAGATAGGACTAGTGAGCCAAGAGCCTGCTTTGTTTGCTACCACAATTCGAGAAAACATACTCTTGGGTAGGCCTGATGCAGACCAGGTTGAGATTGAAGAAGCTGCCAGAGTGGCTAATGCTCACTCTTTCATCATCAAACTTACCGAAGGTTATGAAACTCAGGTAGGGGAGAGAGGGCTGCAACTTTCAGGAGGACAAAAGCAGAGAATAGCAATTGCAAGGGCAATGCTGAAAAACCCAGCAATTCTTCTCCTTGATGAGGCAACAAGTGCATTGGACTCAGAATCAGAAAAGCTGGTTCAGGAGGCCCTTGATCGGTTCATGATTGGTAGAACAACCCTTGTGATTGCTCATCGCCTTTCCACGATTCGTAAAGCTGATCTTGTGGCTGTTCTTCAGCAAGGAAGTGTCACTGAAATTGGAACTCATGATGAGCTTTTTGCCAAAGGTGAAAATGGAGTCTATGCCAAGCTTATAAGGATGCAGGAGACAGCACATGAAACTTCTATCAATAATGCCAGAAAGAGTAGTGCAAGGCCTTCAAGTGCCAGAAACTCTGTAAGCTCACCCATAATTGCACGAAATTCTTCTTATGGCCGGTCACCGTACTCGAGGAGACTGTCTGACTTCTCTACATCTGATTTTAGCCTGTCCCTTGATGCATCACATCCAAATTACAGGCTTGAAAAGCTTGCCTTCAAAGATCAAGCCAGTTCCTTCTGGCGACTTGCAAAAATGAACTCTCCTGAATGGCTTTATGCCTTAATTGGTTCTATAGGCTCTATAGTTTGTGGATCCCTCAGTGCCTTTTTTGCTTATGTTCTTAGTGCTGTCCTCAGTGTCTATTACAATCCAAACCACAGACACATGATCCGAGAAATTGAAAAGTACTGCTACTTGTTGATTGGTCTCTCATCAGCTGCACTCCTCTTCAACACATTGCAGCACTTCTTCTGGGACATTGTTGGTGAAAATCTTACAAAACGAGTGAGGGAGAAAATGTTGAGTGCAGTGCTTAAAAATGAAATGGCTTGGTTTGATCAGGAGGAAAATGAGAGTGCTAGGATTGCAGCAAGGCTATCTCTTGATGCCAACAATGTCAGATCAGCCATTGGAGATCGGATTTCAGTAATTGTGCAGAACACTGCTCTTATGCTAGTTGCCTGCACTGCAGGGTTTGTCTTGCAATGGCGCCTTGCCCTTGTACTAGTAGCCGTCTTCCCTGTTGTTGTTGCAGCCACTGTTTTGCAGAAAATGTTCATGACTGGCTTCTCTGGTGACCTGGAAGCTGCTCATGCGAAGGCCACACAACTAGCAGGAGAGGCTATAGCCAATGTAAGGACAGTTGCTGCTTTTAATTCAGAAAAGAAAATCGTTGGCCTCTTCACCTCCAACCTTGAAACTCCATTGCGGCGCTGCTTTTGGAAGGGACAAATTTCTGGAAGTGGATATGGAATAGCTCAGTTTGCACTCTATGCTTCCTATGCACTTGGTCTTTGGTATGCTTCTTGGCTTGTGAAGCACGGTATATCTGATTTCTCTAGAACAATCAGAGTTTTCATGGTACTCATGGTCTCAGCCAATGGTGCTGCTGAAACCTTAACCCTGGCTCCTGACTTCATCAAGGGTGGTCGTGCCATGAGATCAGTCTTTGAACTCCTTGACCGTAGAACTGAGATTGAGCCGGATGATCCAGATGCTACCCCAGTTCCTGATCGCATTCGTGGCGAAGTAGAACTAAAGCATGTTGATTTCTCTTATCCAACTAGACCAGATATGTCAGTTTTTCGTGACCTTAGTCTTCGTGCCAGGGCAGGCAAAACTCTTGCCCTTGTAGGGCCTAGTGGCTGTGGTAAGAGCTCAGTCATTGCACTCATACAAAGGTTCTATGATCCAACATCTGGCCGAGTCATGATTGATGGAAAGGACATAAGGAAATACAACCTCAAGTCTCTTAGAAGACACATTGCTGTGGTACCTCAAGAGCCATGCCTTTTTGCTACTACTATTTATGAGAACATTGCTTATGGACATGACTCAGCTACTGAAGCTGAGATCATAGAGGCTGCAACTCTTGCCAATGCTCACAAGTTCGTATCTTCTCTGCCTGATGGATACAAGACATTTGTTGGTGAGAGGGGAGTTCAACTATCTGGGGGACAAAAGCAAAGAATAGCAATTGCTAGAGCTTTTTTGAGGAAAGCAGAACTTATGCTTCTTGACGAGGCAACAAGTGCACTTGATGCTGAATCTGAGAGGTCTGTGCAGGAGGCCTTGGACCGTGCCTGCTCGGGGAAAACTACTATCATTGTTGCACATAGGCTATCAACTATTAGGAATGCTAATCTCATTGCAGTGATTGATGATGGGAAGGTAGCAGAGCAAGGCTCACATTCACAGTTGTTAAAAAATCACCCTGATGGGATCTATGCACGCATGATTCAATTACAAAGGTTCACAAATAACCAAGTGGTTGGGGTGGCTTCAGGTTCAAGTTCTTCAGCAAGGCCAAAAGATGATGAAAGAGAAGGCTAG 4008 0.4553 MSQNSEEIKTVEQWRWSEMQGLELVSSSAPISDSHESNATILGEEKEAKKDGASNGTCGGGSGKKKGESVSSVGFGELFRFADGLDYILMAVGTVGAFVHGCSLPLFLRFFADLVNSFGSNANNVDKMTQEVVKYAFYFLVVGAAIWASSWAEISCWMWTGERQSTRMRIRYLEAALEQDIQFFDTEVRTSDVVFAINTDAVMVQDAISEKLGNFIHYMATFVSGFVVGFTAVWQLALVTLAVVPMIAVIGGIHTTTLAKLSSKSQEALSQAGNIVEQTVVQIRVVLAFVGETRALQGYSSALRIAQKIGYRTGFAKGMGLGATYFVVFCCYALLLWYGGYLVRHHYTNGGLAIATMFSVMIGGLALGQSAPSMAAFTKARVAAAKIFRVIDHKPGIDRKSEAGLELESVTGLVELRNVDFSYPSRPEVPILNNFSLSVPDGKTIALVGSSGSGKSTVVSLIERFYDPSSGQVLLDGHDVKTLKLRWLRQQIGLVSQEPALFATTIRENILLGRPDADQVEIEEAARVANAHSFIIKLTEGYETQVGERGLQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQQGSVTEIGTHDELFAKGENGVYAKLIRMQETAHETSINNARKSSARPSSARNSVSSPIIARNSSYGRSPYSRRLSDFSTSDFSLSLDASHPNYRLEKLAFKDQASSFWRLAKMNSPEWLYALIGSIGSIVCGSLSAFFAYVLSAVLSVYYNPNHRHMIREIEKYCYLLIGLSSAALLFNTLQHFFWDIVGENLTKRVREKMLSAVLKNEMAWFDQEENESARIAARLSLDANNVRSAIGDRISVIVQNTALMLVACTAGFVLQWRLALVLVAVFPVVVAATVLQKMFMTGFSGDLEAAHAKATQLAGEAIANVRTVAAFNSEKKIVGLFTSNLETPLRRCFWKGQISGSGYGIAQFALYASYALGLWYASWLVKHGISDFSRTIRVFMVLMVSANGAAETLTLAPDFIKGGRAMRSVFELLDRRTEIEPDDPDATPVPDRIRGEVELKHVDFSYPTRPDMSVFRDLSLRARAGKTLALVGPSGCGKSSVIALIQRFYDPTSGRVMIDGKDIRKYNLKSLRRHIAVVPQEPCLFATTIYENIAYGHDSATEAEIIEAATLANAHKFVSSLPDGYKTFVGERGVQLSGGQKQRIAIARAFLRKAELMLLDEATSALDAESERSVQEALDRACSGKTTIIVAHRLSTIRNANLIAVIDDGKVAEQGSHSQLLKNHPDGIYARMIQLQRFTNNQVVGVASGSSSSARPKDDEREG 1335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2271g00003 1335 Gene3D ABC transporter type 1, transmembrane domain 1035 1312 IPR036640 GO:0005524|GO:0016020
Mupr2271g00003 1335 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1060 1308 IPR027417 -
Mupr2271g00003 1335 SUPERFAMILY ABC transporter transmembrane region 733 1056 IPR036640 GO:0005524|GO:0016020
Mupr2271g00003 1335 ProSitePatterns ABC transporters family signature. 1208 1222 IPR017871 GO:0005524|GO:0016887
Mupr2271g00003 1335 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 414 650 IPR003439 GO:0005524
Mupr2271g00003 1335 SMART AAA_5 441 627 IPR003593 GO:0016887
Mupr2271g00003 1335 SMART AAA_5 1096 1288 IPR003593 GO:0016887
Mupr2271g00003 1335 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 407 653 IPR027417 -
Mupr2271g00003 1335 CDD ABC_MTABC3_MDL1_MDL2 1069 1308 - -
Mupr2271g00003 1335 CDD ABC_MTABC3_MDL1_MDL2 414 653 - -
Mupr2271g00003 1335 Gene3D ABC transporter type 1, transmembrane domain 77 668 IPR036640 GO:0005524|GO:0016020
Mupr2271g00003 1335 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1069 1305 IPR003439 GO:0005524
Mupr2271g00003 1335 FunFam ABC transporter B family member 1 1059 1309 - -
Mupr2271g00003 1335 Gene3D ABC transporter type 1, transmembrane domain 725 1034 IPR036640 GO:0005524|GO:0016020
Mupr2271g00003 1335 FunFam ABC transporter B family member 19 1035 1057 - -
Mupr2271g00003 1335 PANTHER ABC TRANSPORTER B FAMILY 59 801 IPR039421 -
Mupr2271g00003 1335 Pfam ABC transporter 432 581 IPR003439 GO:0005524
Mupr2271g00003 1335 Gene3D - 1058 1309 IPR027417 -
Mupr2271g00003 1335 Gene3D - 404 654 IPR027417 -
Mupr2271g00003 1335 FunFam ABC transporter B family member 1 404 654 - -
Mupr2271g00003 1335 SUPERFAMILY ABC transporter transmembrane region 78 398 IPR036640 GO:0005524|GO:0016020
Mupr2271g00003 1335 FunFam ABC transporter B family member 1 77 412 - -
Mupr2271g00003 1335 ProSitePatterns ABC transporters family signature. 553 567 IPR017871 GO:0005524|GO:0016887
Mupr2271g00003 1335 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 746 1033 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mupr2271g00003 1335 CDD ABC_6TM_Pgp_ABCB1_D2_like 735 1051 - -
Mupr2271g00003 1335 MobiDBLite consensus disorder prediction 26 69 - -
Mupr2271g00003 1335 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 91 379 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mupr2271g00003 1335 Pfam ABC transporter 1088 1236 IPR003439 GO:0005524
Mupr2271g00003 1335 CDD ABC_6TM_Pgp_ABCB1_D1_like 90 387 - -
Mupr2271g00003 1335 FunFam ABC transporter B family member 1 725 1034 - -
Mupr2271g00003 1335 Pfam ABC transporter transmembrane region 747 1016 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mupr2271g00003 1335 Pfam ABC transporter transmembrane region 91 363 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr2271g00003 Mupr-Chr2271 32598 38922 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr2271g00003 65 1330 Calmodulin-binding Proteins AT2G36910 88.556 0.0 2310
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr2271g00003 K05658 - gmx:100777382 2382.83