Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2265g00001 ATGTTGGGTCACACACTGGTCAATGACCGTGCGTGCTCACTAAGGTACCTCTTCACTTCTCACTTCTCTGCTGATTCCATGAAGATGTCACACCTACAACACGACAAAACCTCCGAACCCTCTAATCGTCGTCGTTTTGATTACATTCACACTCAAACTTTCAATCCCTCTGCGCCTTCGGTAATGCCTGACGGGGAATCCTCCACTGTCGCTGGCGGCCAACCGTCCATGGATCCATCGTTAAGCCTCTCACAAGTAAAAAATCATGATGACTCGGTCAAGAAGGATCCTAGAAAAATTGCTAGAAAGTATCAGTTGGAGTTGTGCAAAATAGCTATGGAGGAAAATATAATTGTGTATTTGGGGACAGGGTGTGGGAAGACCCACATTTCTGTGCTTCTTATGCATGAGATGGGTCATTTGATACGGAAACCACAAAAGGACATATGTGTCTTTCTTGCCCCTACTGTGGCTTTAGTTCATCAGCAAGCAAAGGTTATAGAAGACTCTACTGATTTTAAGGTTGGGACTTACTGTGGGAGTTCCAAGCGCTTGAAACGTCATCAAGACTGGGAGCAGGAAATTGGACAATATGAGGTTTTTGTCATGACCCCACAAATATTACTTCACAACTTATCTCATTGTTTCATCACAATGGAGAGGATTGCACTTTTGATATTTGATGAATGTCATCATGCTCAAGTCAAAAGCAACCATGCTTATGCAGAAATTATGAAAGTCTTCTACAAAGGTAATTCCACAAAGGTTCCCCGTATATTTGGCATGACTGCTTCCCCGGTTGTAGGAAAAGGTGCTTCTAGTGAAGCAAATTTAGCAAAAAGCATCAATAGTCTTGAACATATGCTTGATGCTAAGGTGTACTCTGTTGAAGACAAGGAATTGCAGTCTTTTGTGACCACTCCTGTGATTAATATATATCATTATGGTTCAACTTCAAGTGGTGAAACTAGTTTGTACTTGAAAATTGAGGAGATTAAACGCCAGTGCATAGCAACCCTTGGTAGGAGTATTGAAGATCACCAGAAGCGGATAAACACAAAGAAATTTCTGAATCGGATGCATGATAATGTGGTTTTCTGTCTGACGAATCTTGGCATTTGGGGAGCATTGCAAGCTAGTCGTATTCTTCTGAGTGGTGATCGTTCTGAGAGGCATGAATTAGTGGAGGCAGAAGGAAATTCAAGTGATGACTCCCTGTGTGATAAATATCTTACTCAGGCTGCGGAACTATTTACTTCACAATGCATGATAGGTGATGGTATATCTGATTTGTCTTCTGTGGAAATATTGAAAGAGCCATTTTTCTCAGCAAAGCTTTTACGCCTCATTGGGATACTGTCCAACTTTAGAATTGTGACTGCAAGATCCCTGTCATACATACTACAGAAGCTCCAGCTTCTAAGACAATGGAGGAGTGATTTTCTAGTAGGAGTCCATGCTGTTCTTAAGAGTATGTCACGAAAGACCATGAACAGCATTGTTGATAAGTTTCGCTCTGGAGAGTTGAATCTATTGGTTGCAACCAAAGTGGGTGAAGAAGGACTTGACATTCAGACGTGTTGCCTTGTCATACGATTTGATCTTCCAGAAACTGTTGCCAGCTTTATACAGTCAAGAGGCCGTGCACGCATGCCTCAGTCAGAATATGCATTTTTGGTGGACAGTGGCAATCAGAAGGAACTAGACATAATTGATGGTTTTGAGAAAGATGAATACCGAATGAATATGGAAATTACTTTTCGAACATCCAATGAAACATACATCGTCCCTGAGGAAAGAATATTCAGAGTTGATTCATCTGGTGCTTCTGTTAGTTCTGGATATAGTATCTCATTGCTTCACCAGTATTGTTCAAAGCTTCCACATGATGAGTATTTTGACCCCAAACCAAATTTTTATTACTTAGATGGATCAGAGGGAATTGTCTGCCACATAACATTGCCTTCCAATGCACCAATACACCAAATTTTGGGTACACCGCAGTTGTCTATGGAAGCTTCCAAAAGAGATGCTTGCCTGAAAGCAATAGAAGAACTGTATAAATTAGGTGCTTTAAGTGATTGTCTCTTGCCAAAGCAAGTTGATGCAGAGCCAGAGGAGCAGGTTTCAGGTTCTTATGATGAAGATGAATGTGAAGATGTCATATCAAGAGGAGAATTACATGAGATGCTAGTTCCTTCTGCTTTTGGACAGTCATGGATAAACGAGGATAAAATTGTCCGTCTCAACTCTTATTACATAAAATTTTGTCCCTGTCCTGATGATAGGGTCTACAAAGAGTTTGGTCTATTCATCATGGCACGTCTGCCAATGGAGGCTGAGAAATTGGAACTTAATCTCCATCTTGCTCATGGTCGATCTGTGATGACAAAATTTGTCCCATTTGGAGTTATAGAATTTGACAAAGATGAGATTAAGATGGCAGAGTGTTTTCAAGAAATGTTCCTCAAAATTATTCTTGATAGATTACAATTTGTTTCTGAGTTTGTAGACTTGGGTAAGGGTGCTGAATCTCACACAAGCACATCAACCTTCTACCTTTTGCTTCCAGTCATATTGCAAGATTATAGAAATGTCATGAAAGTAGATTGGAAGACAGTGAAGAGATGCCTTTGCTCACCAGTTTTCAGGCATCCAGCAGATACTATGGATAAAAAAGTTTTCCCCTTAGATATTCACCTGCAACTTGCCAATGGTTACAGAAGTGTAAGAGATGTTGAGAATAGTTTAGTGTATGCCCCACACAAGAAGATCTTTTATTTTGTCACGAATATTAACTATCAAAAGAATGGATTTAGTACTCATAAAGATTCAGGCACTTCAAGCTATATGGACTACTTCATTGAAAAGTTTTCCATTCACCTCAAATGCCCGGAACAACCACTTCTGCTTGTAAAACCACTCTCCAATTTGCACAACCTGCTACACAACCGAAAGCAAGAGGATGCAGAACCACATGAGTTGGAGGAATACTTAATTTATTTGCCTCCTGAGCTATGTGAACTGAAAGTAATAGGCTTTTCGAAGGATATTGGCAGTTCTATATCTTTGCTACCCTCAATTATGCATCGTCTTGGAAACTTCTTGGTGGCTATTGAACTCAAGCATGTGCTATCTTCTTCCTTTCCAGAGGCATCTGAAATTAGTGCCCATAGAGTTCTAGAGGCTCTCACCACTGAGAAGTGTCAGGAGTGCTTTTCCCTTGAAAGACTTGAAGTGCTTGGTGATGCATTCCTTAAATTTGCTGTTGCACGTCATTTTTTTCTCATGCATGACAGCCTTCATGAAGGAGACCTTACAAAAAGGCGTTCCAATGCTGTAAATAATTCCAATTTGTTTAAGTTGGCTATTAGGCGCAATTTGCAGGTCTATATATGTGATCAAACATTTGATCCCTCTCAGTTTTATGCATTAGGCCGTCCTTTCCCGATAGTTTGTAGCAAGGAAACCAAAGAAAGCATACACTTCTGTTTAAACTCTGTTGAGGAACAAGGAAGAGCAACTGAAACCCGATGTAACAAAAATCATCATTGGTTACATAGGAAAACAATTGCTGATGTGGTCGAAGCTCTGATTGGAGCATTCCTAGTTGACAGTGGCTTTAAAGCTGCAATTTCCTTTCTTACATGGATTGGCATACAAGTTAATTTTGAAGCTTCACAAGTAGCTAATATTTGCATAGCAAGTGCTAGTTATTTCCCTGTTTCTTCTGATGTAGATATTCCTTCTCTTGAAAGTAAGCTAGGACATCACTTTGTTCATAAGGGTCTACTTCTCCAGGCATTTGTACATCCTTCTTACAATAAGCATGGAGGAGGCTGTTATCAGCGATTGGAGTTTCTTGGAGATGCTGTCTTGGATTATTTGATTACTTCATATCTATTCTCAGCTTATCCCAAACTAAAGCCTGGTCAATTGACAGATTTGAGATCATTATCTGTTAACAATAAGGCATTTGCTTGTGTAGCAGTAGAGCACAGTTTTCATGAATTTCTCTTATGTGATTCAAATGGCCTGTCTGAGGCAATAAAAAAGTATGTGGACTACATTAGAAGACCTGTATCAGATAGTGGCATTAAAGAAGGGCCAAAATGTCCCAAGAGTAGTCGTGGGGAATACTATAAGTACTGCAAAAGACTCGGACATATCAAGGATACCTGCTACAAGCTTTATGGAAAGGAGAAAGGCCAGCTAGTAACTCTATCATGGACTAAGTGGTTTTTATCATTTATTAATGACTGTACTCGTGTGACAGAGATATTTCTTATGAAACATAAATTTGAGGTTTGTCAAATATTTGTCGATTTTTTTCGTCTTGTCAAAAGCCAATTTGGTAAATGTATTAAAAGACTATGGTCAGATAATGGTACCAAATTTGTAAATATTGAATTCTCCAAGTTTCTTAAAGATAATGATGTGGTTCATGAACTAACATATGTGAATATTCCCCAACAAAATGGAGTTGCAAAAAGGAAAAATTGTCATCTACTTGAGGTTGCTAGAACCCTCCTTTTCCAAATGTCTATTCCTAATGTCTATTGGGGAGAAGTTGTCCTAACTATCACCTATCTCATCCTAGAACATCAGAGTTTTATTGCAATCATTGATGCAATCAAAACACCTACATCAATACAAGAAGCTTTGAAAAATGAGAATTAG 4680 0.3925 MLGHTLVNDRACSLRYLFTSHFSADSMKMSHLQHDKTSEPSNRRRFDYIHTQTFNPSAPSVMPDGESSTVAGGQPSMDPSLSLSQVKNHDDSVKKDPRKIARKYQLELCKIAMEENIIVYLGTGCGKTHISVLLMHEMGHLIRKPQKDICVFLAPTVALVHQQAKVIEDSTDFKVGTYCGSSKRLKRHQDWEQEIGQYEVFVMTPQILLHNLSHCFITMERIALLIFDECHHAQVKSNHAYAEIMKVFYKGNSTKVPRIFGMTASPVVGKGASSEANLAKSINSLEHMLDAKVYSVEDKELQSFVTTPVINIYHYGSTSSGETSLYLKIEEIKRQCIATLGRSIEDHQKRINTKKFLNRMHDNVVFCLTNLGIWGALQASRILLSGDRSERHELVEAEGNSSDDSLCDKYLTQAAELFTSQCMIGDGISDLSSVEILKEPFFSAKLLRLIGILSNFRIVTARSLSYILQKLQLLRQWRSDFLVGVHAVLKSMSRKTMNSIVDKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQKELDIIDGFEKDEYRMNMEITFRTSNETYIVPEERIFRVDSSGASVSSGYSISLLHQYCSKLPHDEYFDPKPNFYYLDGSEGIVCHITLPSNAPIHQILGTPQLSMEASKRDACLKAIEELYKLGALSDCLLPKQVDAEPEEQVSGSYDEDECEDVISRGELHEMLVPSAFGQSWINEDKIVRLNSYYIKFCPCPDDRVYKEFGLFIMARLPMEAEKLELNLHLAHGRSVMTKFVPFGVIEFDKDEIKMAECFQEMFLKIILDRLQFVSEFVDLGKGAESHTSTSTFYLLLPVILQDYRNVMKVDWKTVKRCLCSPVFRHPADTMDKKVFPLDIHLQLANGYRSVRDVENSLVYAPHKKIFYFVTNINYQKNGFSTHKDSGTSSYMDYFIEKFSIHLKCPEQPLLLVKPLSNLHNLLHNRKQEDAEPHELEEYLIYLPPELCELKVIGFSKDIGSSISLLPSIMHRLGNFLVAIELKHVLSSSFPEASEISAHRVLEALTTEKCQECFSLERLEVLGDAFLKFAVARHFFLMHDSLHEGDLTKRRSNAVNNSNLFKLAIRRNLQVYICDQTFDPSQFYALGRPFPIVCSKETKESIHFCLNSVEEQGRATETRCNKNHHWLHRKTIADVVEALIGAFLVDSGFKAAISFLTWIGIQVNFEASQVANICIASASYFPVSSDVDIPSLESKLGHHFVHKGLLLQAFVHPSYNKHGGGCYQRLEFLGDAVLDYLITSYLFSAYPKLKPGQLTDLRSLSVNNKAFACVAVEHSFHEFLLCDSNGLSEAIKKYVDYIRRPVSDSGIKEGPKCPKSSRGEYYKYCKRLGHIKDTCYKLYGKEKGQLVTLSWTKWFLSFINDCTRVTEIFLMKHKFEVCQIFVDFFRLVKSQFGKCIKRLWSDNGTKFVNIEFSKFLKDNDVVHELTYVNIPQQNGVAKRKNCHLLEVARTLLFQMSIPNVYWGEVVLTITYLILEHQSFIAIIDAIKTPTSIQEALKNEN 1559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2265g00001 1559 Pfam Ribonuclease III domain 1283 1354 IPR000999 GO:0004525|GO:0006396
Mupr2265g00001 1559 Pfam Ribonuclease III domain 1076 1207 IPR000999 GO:0004525|GO:0006396
Mupr2265g00001 1559 Gene3D - 99 335 IPR027417 -
Mupr2265g00001 1559 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 108 284 IPR014001 -
Mupr2265g00001 1559 ProSiteProfiles PAZ domain profile. 911 1011 IPR003100 GO:0005515
Mupr2265g00001 1559 SMART riboneu5 1058 1227 IPR000999 GO:0004525|GO:0006396
Mupr2265g00001 1559 SMART riboneu5 1263 1423 IPR000999 GO:0004525|GO:0006396
Mupr2265g00001 1559 SUPERFAMILY Ribonuclease H-like 1411 1532 IPR012337 -
Mupr2265g00001 1559 SUPERFAMILY PAZ domain 908 1009 IPR036085 GO:0005515
Mupr2265g00001 1559 PANTHER DICER-RELATED 114 1367 - -
Mupr2265g00001 1559 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 442 595 IPR001650 -
Mupr2265g00001 1559 FunFam Endoribonuclease dicer-like 1 611 707 - -
Mupr2265g00001 1559 SUPERFAMILY RNase III domain-like 1247 1346 IPR036389 GO:0004525|GO:0006396
Mupr2265g00001 1559 Gene3D Dicer dimerisation domain 612 707 IPR038248 -
Mupr2265g00001 1559 ProSiteProfiles Ribonuclease III family domain profile. 1248 1369 IPR000999 GO:0004525|GO:0006396
Mupr2265g00001 1559 CDD RIBOc 1264 1340 IPR000999 GO:0004525|GO:0006396
Mupr2265g00001 1559 Gene3D Ribonuclease III domain 1054 1218 IPR036389 GO:0004525|GO:0006396
Mupr2265g00001 1559 Gene3D Ribonuclease III domain 1244 1389 IPR036389 GO:0004525|GO:0006396
Mupr2265g00001 1559 Pfam Helicase conserved C-terminal domain 483 550 IPR001650 -
Mupr2265g00001 1559 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 149 565 IPR027417 -
Mupr2265g00001 1559 MobiDBLite consensus disorder prediction 53 87 - -
Mupr2265g00001 1559 FunFam Endoribonuclease dicer-like 1 1242 1391 - -
Mupr2265g00001 1559 FunFam Endoribonuclease dicer-like protein 96 335 - -
Mupr2265g00001 1559 ProSiteProfiles Ribonuclease III family domain profile. 1025 1207 IPR000999 GO:0004525|GO:0006396
Mupr2265g00001 1559 Gene3D paz domain 906 1009 - -
Mupr2265g00001 1559 CDD DEXHc_dicer 99 298 - -
Mupr2265g00001 1559 Pfam Type III restriction enzyme, res subunit 110 266 IPR006935 GO:0003677|GO:0005524|GO:0016787
Mupr2265g00001 1559 Pfam Dicer dimerisation domain 616 700 - -
Mupr2265g00001 1559 ProSiteProfiles Integrase catalytic domain profile. 1387 1556 IPR001584 GO:0015074
Mupr2265g00001 1559 Gene3D - 1395 1537 IPR036397 GO:0003676
Mupr2265g00001 1559 ProSiteProfiles Dicer double-stranded RNA-binding fold domain profile. 616 706 IPR005034 GO:0016891
Mupr2265g00001 1559 MobiDBLite consensus disorder prediction 53 96 - -
Mupr2265g00001 1559 FunFam Dicer-like 103 906 1009 - -
Mupr2265g00001 1559 Gene3D - 433 586 IPR027417 -
Mupr2265g00001 1559 SMART PAZ_2_a_3 889 1037 IPR003100 GO:0005515
Mupr2265g00001 1559 CDD RIBOc 1061 1217 IPR000999 GO:0004525|GO:0006396
Mupr2265g00001 1559 Pfam PAZ domain 911 1032 IPR003100 GO:0005515
Mupr2265g00001 1559 SMART helicmild6 471 552 IPR001650 -
Mupr2265g00001 1559 SUPERFAMILY RNase III domain-like 1058 1221 IPR036389 GO:0004525|GO:0006396
Mupr2265g00001 1559 ProSitePatterns Ribonuclease III family signature. 1283 1291 IPR000999 GO:0004525|GO:0006396
Mupr2265g00001 1559 SMART ultradead3 97 302 IPR014001 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr2265g00001 Mupr-Chr2265 3680 24053 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr2265g00001 460 549 Eukaryotic Initiation Factors Gene Family AT3G19760 31.111 4.36e-06 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr2265g00001 K11592 - gmx:100818702 2373.97