Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2245g00007 ATGTCAGAATCTGAGGAAGAAAAACCAGACTATGTTCCCACATCAAAAGCTGCAGAGGAAGTTGGTTGCAGCATGGACTTCGATCTGGACTTAGAAAGTTCATGGCCGTTGGATCACATGGCCTTTGTCTCCAATCCTATGTCACCTCTTCTGTTCTCCACCTCCTCTGACCAACCTTACTCTCCTCTCTGGGCTTTCTCTGATGATGGAGAGGATGACAGACACCCCAAGCTTCCACTTTCTGCCTTCTCTGATTGCCACAAGATCTTCCCTTGCGATTCAAATTCAATAGCTGAAAAGCCATTAAATGATGACAAGGAAAAACTTTTGCCACCACTTGTGCCTCCGCCACCTGTGGAAAATTTGGATGGTTATTGTGTAATAATAAAGGAAAGGATGACACAAGCACTTCGTCACTTCAAAGAGTTAACTGAACTGAATGTTTGGGCACCTGTGAAGAATGGTAATCGGTATGTGCTTACAACTTCAGGTCAACCCTTTGTTCTTGATCCACATAGTAATGGACTCCATCAGTACAGAACAGTCTCTCTAATGTACATGTTTGCTGTGGATGGAGAGAATGATGGAAGTTTGGGACTCCCTGGTCGGGTTTTTCAGCAGAAATTACCAGAATGGACTCCCAATGTTTTGTATTATTCTAGTAAAGAGTATCCACGCCGAGATCATGCTCAACATTACAATGTTCGTGGAACCTTGGCTTTGCCTGTGTTTGAACCTGCATTGCAGTCATGTGTTGGTGTGCTGGAGTTGATAATGACTTCACAGAAGATTAACTATGCTCCTGAGGTTGATAAAATCTGCAAAGCCCTTGAGATTCATCAATCACGGGCTGTCAGTTTCCTTGCAGACAGTAAATTTGAGGAGTTCGGAAATTTTGGAGCATCCATATACTCAGGCCGTCAGAACGCATTATCAGAAATCTTGGAGATATTGACAGTGGTGTGTGAAACTCATAATTTACCTCTGGCTCAGACATGGATTCCCTGTAGGCATCGAAGTGTCTTGACACAAGGTGGTGGTATAAAGAAAAGTTGTTCTAGTTTTGATGGAAGCTGCATGGGGAAAGTTTGCATGTCTACAACTGACATAGCATGCTATATTATAGATGCTCATTTATGGGGTTTCCGTGAGGCCTGTGTTGAGCATCACTTACAACAAGGTCAAGGGGTTGCTGGGAGGGCTTTTTTGTCCCACGGCATGTGCTTCTGTTCAAACATTACTCAGTTCTGCAAAACTGATTACCCCTTAGTTCATTATGCTCTCATGTTTGGGTTAACAAGCTGTTTTGCAATATGTTTACGAAGCTCTCATACAGGAAATGATGATTATGTGTTGGAGTTTTTTCTGCCTCCTCGAGTCGCAGACTCTTGTGAACAGAAGACTTTGTTGGGATCCATATTGGCCACAATGAAACAGCATTTCCAGAGTCTTAAGCTTGCTTCTGGCGTTGAACTTGAGGATCGTTCAATTGAGATTATTGAAGCAACAATTGAAAGAGTTCATACGAGGCTTGAGTCTATTCCCATTGCCCCATCTATTAAATCACCACCTAGACATGATACGTCACCAAATATGGTGGAGGAAGTGCCATCAGAACAACAAATATTGATGTACTGTAATGACATCAATGATGGAGGGAGTCTCGGTGATAATGCCGGTGTAAACATTGATCATATGCCCTCCTTAGAAACTAAAAACATAAAGAAACCCTTAGAGAGGAAACGTGGAAAAACTGAGAAATCAATTAGCCTTGAAGTCTTGCAACGATATTTTGCTGGGAGTCTTAAAGATGCTGCAAAGAGCCTTGGTGTTTGCCCTACCACAATGAAGCGCATCTGCAGGCAACATGGGATATCCCGATGGCCATCTCGAAAGATCAACAAGGTTAACCGTTCCCTGTCGAAGCTCAAGCGTGTCATTGAATCTGTCCAAGGTGCTGAAGGAGCATTTGGTTTGAATTCTCTCAACACAAGTCCACTTCCCACTGCTGTTGGTTCCTTTCCTGAGCCTTCTACTCCAAACAAGTTCAGCCAGCCGACATCATTAAGCATTAGGCCATCAGAGCCTCAGATGAAAGATAATGAATTGAATGTCTCCAAGGTTCTAGAAACAAACAGACAGGCTGAAATGGAAGATCAATTTCTAGGAGGAAAGACACAGAATCTTGAGAAAGCAATTAATGATAGAGGTTGGTGTACTCAAGAGGTTGGGAAAGAACCAAAAAGGACTAGAACTGGGAGTGGCTCAAGCGAGGATAGCACAAATCCTACTTCTCGTGGTTCATGCCATGACAGTCCCCCAAATGAAAGTTCACCTGTAAAGGATATATTCATTACTTCCAACAATGATCAATGTGCTGTGCTAAGGCTATCACCAGAGTCAACACTGCAGCCAACTACTAATACACTGAACCTCCCAACTGCTTACCCTATGCTGGACTTTGTGGCTGCAGAACTTCAAGAGCAATTTGGAGGAATGCTAGTAGAGGATGCTGGTAGTTCTAAAGACTTAAGAAATTTGTGTCCTTCAGTAGCTGAGGCCATTTTGGAGGATCTGGTTCCAGAAGCTTGTGGGAGGACTAGTCCTCCAGGTTTAGATCTGTCTCCTAAGCAAAGCATGGATACTCCCAACAAAGCAGTGACACCTTTTGCAGCTAGGAAAGAAATGAAAACTGTGACTATCAAGGCAACATACAGAGAAGATATCATAAGATTTCGGGTCCCTTTGATGTGTGGCATTGGTGAACTCAAAGAAGAAGTTGCCAAAAGATTGAAACTAGAGGCAGGTACATTTGATATCAAGTACCTGGATGATGATCACGAATGGGTTTTGATAGCCTGTGATGCAGACCTGCAGGAATGCATGGATGTTTCAAGATCATCAGGAAGCAACATAATAAGGGTTTTGGTGCATGACATAATGTCCAATCTTAAAGTTGAATAA 2964 0.4288 MSESEEEKPDYVPTSKAAEEVGCSMDFDLDLESSWPLDHMAFVSNPMSPLLFSTSSDQPYSPLWAFSDDGEDDRHPKLPLSAFSDCHKIFPCDSNSIAEKPLNDDKEKLLPPLVPPPPVENLDGYCVIIKERMTQALRHFKELTELNVWAPVKNGNRYVLTTSGQPFVLDPHSNGLHQYRTVSLMYMFAVDGENDGSLGLPGRVFQQKLPEWTPNVLYYSSKEYPRRDHAQHYNVRGTLALPVFEPALQSCVGVLELIMTSQKINYAPEVDKICKALEIHQSRAVSFLADSKFEEFGNFGASIYSGRQNALSEILEILTVVCETHNLPLAQTWIPCRHRSVLTQGGGIKKSCSSFDGSCMGKVCMSTTDIACYIIDAHLWGFREACVEHHLQQGQGVAGRAFLSHGMCFCSNITQFCKTDYPLVHYALMFGLTSCFAICLRSSHTGNDDYVLEFFLPPRVADSCEQKTLLGSILATMKQHFQSLKLASGVELEDRSIEIIEATIERVHTRLESIPIAPSIKSPPRHDTSPNMVEEVPSEQQILMYCNDINDGGSLGDNAGVNIDHMPSLETKNIKKPLERKRGKTEKSISLEVLQRYFAGSLKDAAKSLGVCPTTMKRICRQHGISRWPSRKINKVNRSLSKLKRVIESVQGAEGAFGLNSLNTSPLPTAVGSFPEPSTPNKFSQPTSLSIRPSEPQMKDNELNVSKVLETNRQAEMEDQFLGGKTQNLEKAINDRGWCTQEVGKEPKRTRTGSGSSEDSTNPTSRGSCHDSPPNESSPVKDIFITSNNDQCAVLRLSPESTLQPTTNTLNLPTAYPMLDFVAAELQEQFGGMLVEDAGSSKDLRNLCPSVAEAILEDLVPEACGRTSPPGLDLSPKQSMDTPNKAVTPFAARKEMKTVTIKATYREDIIRFRVPLMCGIGELKEEVAKRLKLEAGTFDIKYLDDDHEWVLIACDADLQECMDVSRSSGSNIIRVLVHDIMSNLKVE 987
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2245g00007 987 CDD PB1_NLP 899 979 IPR034891 -
Mupr2245g00007 987 MobiDBLite consensus disorder prediction 735 782 - -
Mupr2245g00007 987 ProSiteProfiles RWP-RK domain profile. 575 656 IPR003035 -
Mupr2245g00007 987 FunFam RWP-RK domain-containing protein 895 979 - -
Mupr2245g00007 987 Pfam PB1 domain 898 979 IPR000270 GO:0005515
Mupr2245g00007 987 SUPERFAMILY CAD & PB1 domains 896 982 - -
Mupr2245g00007 987 MobiDBLite consensus disorder prediction 754 782 - -
Mupr2245g00007 987 Gene3D - 895 979 - -
Mupr2245g00007 987 PANTHER PROTEIN NLP8 56 983 IPR045012 GO:0003700
Mupr2245g00007 987 MobiDBLite consensus disorder prediction 674 702 - -
Mupr2245g00007 987 Pfam RWP-RK domain 588 636 IPR003035 -
Mupr2245g00007 987 ProSiteProfiles PB1 domain profile. 898 980 IPR000270 GO:0005515
Mupr2245g00007 987 SMART PB1_new 898 980 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr2245g00007 Mupr-Chr2245 44494 50113 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr2245g00007 895 984 NLP Transcription Factor Family AT1G64530 57.143 3.24e-25 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Mupr2245g00007 PB1 4.5e-19 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr2245g00007 - - gmx:100785821 1644.02