Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2245g00003 ATGGGTAGCGTCGTTGAAGAGGTTACAATTTCGGGAGAGGAACTGGAAGACGCAGACACTGTGTATGTGGCGGTGGGAAACAACGCCGACAAGACCCAACAACTGTTGCATTGGGCAGCCAACAATTTCTCTGGCAAAAATATTTGCCTTCTTCATATTCACCAATCTCACTCTCTCAATTCCTTTGCAGACAGAAATCTCTCTGGGTATGAACCAAAAGACCATGCAACCAAGGCATTCCAGGAGCATGTAAATCAAACAGTGCACAAACTTCTTGACCAATACATTCTCACTCTGGTCCCGGCAGGGGTACGGGCCTATAAATTGTTGATTGAGATGGATGATATCGAGAAAGGAATTGCTAAAGCTATTGCTCTACACAATATTAGATGGCTCGTGATGGGAGCAGCAGCAAATGGATATAACTTGGGGGTATATAGTAAGCATACTTCTGAATTAGAGACCGCCCCTGCACTGTTGGTGCTCAATTCAAATACTGAAGCCAAACAAGAAAAGATTAAATCAGAATTGATTCCTGCTGCATTGAAATATCTAGATTTTGATGATATGGAAGAGACCGAAAGTGTCAGTTCCCAGTGTTCATTAAATTCAAAATGCTCTTCTAATAATGTTATGGACAGGTCAAAGTTGGCAGATTTGATGTTTCATGAGGATGAAGCATTTGAAAGCCAGTGTGCTAAGGAGATAAAAAGAAGAAAAGAAGTTGAAGAACAATTGGCAAGGGAAAAGCAAGAAGTACAGAAAATGAAGAATCAGCGAGATGAAGTACTTGATGAATTGCAAAGGGTCCAAGAACAAAATTCGTTACTTATGAACCAAATTTCTGAGTCCCAGTGTACAGCAACAGAGTTGGAGGAGAAGATCATATTAGCTGTGGACCTCTTGATAAGTTTCAGGGAAAGGCGAGATAGGCTTAGGATAGAGCATGCAAATGCAGTTAGGGAGGCCAAAGTGCTGAGAAATTTTGGGGTAGATACTGCCTTCTCTTATCGAGTAGAATTTCCTGCATTTTCTTTCTTAGAGATCAATGAGGCAACTCATGATTTCGATCCATCTTGGAAGATTGGAGAGGGAAGGTATGGAAGTGTTTACAAGGGACTGCTTCACAACATGCATGTTGCCATAAAAATGTTACCATCTTATGGTTGTCAGAGCCTATTAGAGTTCCAACATCAGGTAGAGGTTTTGAGTAGGGTAAGACATCCAAACCTGTTAACTCTAATTGGAAGCTGTGCAGAGTCTAGGTCACTTGTGTACGAGTACATAAACAATGGCAGCCTTGAAAGCCATCTTGCCCGCAAAGATAAGAATCCACTTTCATGGCAAATTCGAATATCCATTGCTACTGACATATGCTGTGCTCTAATCTTCCTTCACTCCAGTGAGCCTTGTATTATCCATGGGAACTTGAAACCTAGTAAGGTTCTCCTTGATGCTAACTTTGTTGCCAAACTCAGTGACTTGGGCATTCCTGGTTTAGTCCAGCAAAGTTTGGATTCAGCTGACACAAGTTCAATATTTCATAACCCAAATGAACGTTTGGCATATGTGGATCCAGAGTATTTTGTCACTGGCAAGTTTACACCCGAATCAGATGTATATTCATTCGGAGTTATATTGTTACAACTTCTAACTGGAAGACCACTTTTGGGGCTAGTTAGAGATATGAAATGTGCATTGGAAAAGGAAAACCTTAAAGCAGTCTTGGACTTTTCAGCTGGTGAATGGCCACTTTATCAAACTAAACAGCTGGCATATTTAGCATTGAGGTGTTGTGAAAAGACTTGGTTGAACCGGCCAGACCTTGTGTCAGAAATCTGGAGTGTTCTTGAACCATTCAAAGCTACTTGCATTGACATGCCACCTTATTTGACTTCTAAGAAGCTTCAGCGTGTTCCTTCCCATTTTGTCTGCCCCATTGTCCAGGAAGTAATGGAAGATCCATACATAGCTGCAGATGGCTTTACGTATGAAGCAGAGGCAATAAGAGGATGGTTGAATAGTGGCCACGACACTTCCCCCATGACAAACCTCAAGCTTGATCACACAGATTTGGTACCTAACTATGCTCTACATAATGCAATTCAGGAGTGGCAGCAGCAGTGA 2127 0.417 MGSVVEEVTISGEELEDADTVYVAVGNNADKTQQLLHWAANNFSGKNICLLHIHQSHSLNSFADRNLSGYEPKDHATKAFQEHVNQTVHKLLDQYILTLVPAGVRAYKLLIEMDDIEKGIAKAIALHNIRWLVMGAAANGYNLGVYSKHTSELETAPALLVLNSNTEAKQEKIKSELIPAALKYLDFDDMEETESVSSQCSLNSKCSSNNVMDRSKLADLMFHEDEAFESQCAKEIKRRKEVEEQLAREKQEVQKMKNQRDEVLDELQRVQEQNSLLMNQISESQCTATELEEKIILAVDLLISFRERRDRLRIEHANAVREAKVLRNFGVDTAFSYRVEFPAFSFLEINEATHDFDPSWKIGEGRYGSVYKGLLHNMHVAIKMLPSYGCQSLLEFQHQVEVLSRVRHPNLLTLIGSCAESRSLVYEYINNGSLESHLARKDKNPLSWQIRISIATDICCALIFLHSSEPCIIHGNLKPSKVLLDANFVAKLSDLGIPGLVQQSLDSADTSSIFHNPNERLAYVDPEYFVTGKFTPESDVYSFGVILLQLLTGRPLLGLVRDMKCALEKENLKAVLDFSAGEWPLYQTKQLAYLALRCCEKTWLNRPDLVSEIWSVLEPFKATCIDMPPYLTSKKLQRVPSHFVCPIVQEVMEDPYIAADGFTYEAEAIRGWLNSGHDTSPMTNLKLDHTDLVPNYALHNAIQEWQQQ 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2245g00003 708 SUPERFAMILY Protein kinase-like (PK-like) 334 618 IPR011009 -
Mupr2245g00003 708 SMART Ubox_2 642 705 IPR003613 GO:0004842|GO:0016567
Mupr2245g00003 708 Coils Coil 232 280 - -
Mupr2245g00003 708 ProSiteProfiles Protein kinase domain profile. 356 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr2245g00003 708 Pfam U-box domain 639 707 IPR003613 GO:0004842|GO:0016567
Mupr2245g00003 708 Gene3D Phosphorylase Kinase; domain 1 332 428 - -
Mupr2245g00003 708 SUPERFAMILY RING/U-box 636 708 - -
Mupr2245g00003 708 PANTHER OS02G0152300 PROTEIN 21 704 - -
Mupr2245g00003 708 Gene3D Transferase(Phosphotransferase) domain 1 429 624 - -
Mupr2245g00003 708 ProSiteProfiles U-box domain profile. 638 708 IPR003613 GO:0004842|GO:0016567
Mupr2245g00003 708 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 21 139 - -
Mupr2245g00003 708 Pfam Protein tyrosine and serine/threonine kinase 361 609 IPR001245 GO:0004672|GO:0006468
Mupr2245g00003 708 CDD RING-Ubox_WDSUB1-like 640 695 - -
Mupr2245g00003 708 ProSitePatterns Protein kinases ATP-binding region signature. 362 383 IPR017441 GO:0005524
Mupr2245g00003 708 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 638 708 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr2245g00003 Mupr-Chr2245 14294 23238 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr2245g00003 226 708 U-box Gene Family AT3G49060 53.279 1.63e-166 496
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Mupr2245g00003 PK_Tyr_Ser-Thr 3.4e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr2245g00003 - - gmx:100799675 1204.5