Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2245g00002 AGACCGAACCGCAATTCAACATCACGTAGAAACGTTTTTCGCCCTACTACAACTGCAGCCTGCGGGAAGGAGAGAGAGAGTTCTCTCTCATACGCTATTTTCTCGCGTTTTCTCAACGATTTTCCTTCCATCCAAACACTCTCAAACCCTTCGCAGCCGATTGCGGTTCTCCTTTGGATCGTCACAACAGAATCTGTTCGACCTCCAAGTGATCTCTTCCTCGTCCTTCCTCTCTGTGGAATCTTGCAAAGTTTCTTGATGCCAGTTGCAAAACTCACGGCCTCTGGTACTCCCAATTTCACGAAAACAGATGATGGAAATGATTCTTTAGATACGATTATCAGACAAGCAATTGGAAGAGAACCTTTCCTTTCCTTCCCTAGGGCCGGTGACAGCCCAGTACAATGGATTCAATTGCTTCATGATGCTTTAGATCAGCAAGGGTGGCCTTTGCTCTCTCCTGTGAAGGTTCAGTTACAAAAGTGCAACAAGTGTTCTCGAGAATTTTGCTCTCCCATTAACTATAGAAGACATATACGCATACAGCATCGGTTGAAAAAGCTTGATAAGGATTCTAAAAAGAATAGGGATCTTTTAGGGGCATATTGGGATAAGCTCTCCATAGAAGAGGCAAAGGAAGTTGTGTCATTCAAGAATGTGATGCTGGAGGAAGTTCCAGGGTCTTCAATTTTAGAAGCTTTGGCAACTCTTAGAAAACAAGGATTTTCTTTTCCGCAATATTATCTGAGGGCTGGTTCTGCCCTTTTGAATATTGTTCAATTCAGGCCTTCTAGTTTTCCTATATCTTCCCAAGAGTTGTTCAGTATCCTAGATGATTCTAGTGAAAAAACATTTTTGGGTGGATCAGCAGTGTCAATGCAAAGATATGTTTTTGATGGAGAGGCTGGAAAAATTGGTCTTGAACCAAAAAACCTAGTTGCTTGCACAGGTTTCTTGCTAGAACAGAAACTGGTGAAGGCCTGGCTTGCTGACAAGGATGCTGAAGCATTGAGATGCCAGAAGCTGCTGGTGGAGGAGGAGGAAGCTGCTCAGAAAAGAAAAGCTGAGATTTTAGAGAGGAAACGCCAGAAAAAGCTTAGACAGAAAGAACATAAGGCAAGAGAACGACTCGAAGATGATTCAGAAATTAAAGAGAACACAAGCTGCACCGGAGAGGATGTATCGCCAGCAGAAGCATCTGTGGTTACATGTGATTTTGAAGCACATAATCAAGAAATATTTGCGGATCGTTCTCCTCCATTACATGTAACTTCTCACTGCCTAGTCGACGAAGTTGTAGAAGGGGATAGAGTGTCAGGGTATGATTGTGACACTGATCAGTATATAGAGCGACAGACATCACGAGGACATAACCGCCGGCGCACAATGGCTGCCAGATGGCAAGGGCTGCCAAAATCACAATGGGCTAGAGCTAATGGTTCGCATGCATGCCAGAATTCTCAAATGTCAAAGCTTGGAGTTGTTCAAAAACATGGAACCAACCGTGATCAAAGGGCAGCTCCTATAGTTAATGGTAGTAAGTTTTGGAGCCGAAAACCTAAACCAGAAACTAATGGGGTGTTTTTAAAAGCCAAACTGCAGAAAGAACCAGACAAAGGTAAGAATCATGAAGTTTTGATAGGATCTGTATCTGTTAGTCTGGGTAATTGCAGCCATTCAGAAAGTAATTCTGTGGCACCCCAGCGGGACTGCTTGGTAGAGAATCTGGCCAAGCAGAATACTGCTCAGGAGAAGCTAGGGAAACTCGATTTCTCTCAGGGAGGCAATGCTCGATTAACAGTTAAACTCTGGAGGCCGGTTAGCCAGCATGGAACTAAAGATCAATTGCCACTTCAAAATGGTGGGACAGAAGCTGATGTAATTAATGGAAAATATGACCAAAATTTGTCAAGTCAAAGTAGTTTAAGGTTGTGTAGTATAGATGGTAGTGATATTGGTTTGGGGGACAAATTTTCCCATACTGGGGCTAAAGTAGATTCAGAAAGCTTAGGTCTATCCAGCCATGCTGCAAAAGCCTTTCTTGGACAAAGATGGAAAGAAGCTATCTCATCAAACCATGTGAGGTTGGTTGTTACACCTGATTTTGAGCTTCTTGGAGGTCAGCAGGTACAGGATTGTGAATTTGCAGCATGTCAATCTTCTAATGTGGAAAGATGTAGCATTCGTGCAGATGCAGAGAACCGGTTGCCTGAAGAAACCTCCTCCGGAGTTGCTAAATCCAAACCGAGAACAAAGCCTGAGAAGGGAATGAAGATAAAGTACATTCCGAAACAAAAAGCAGCAACC 2307 0.433 RPNRNSTSRRNVFRPTTTAACGKERESSLSYAIFSRFLNDFPSIQTLSNPSQPIAVLLWIVTTESVRPPSDLFLVLPLCGILQSFLMPVAKLTASGTPNFTKTDDGNDSLDTIIRQAIGREPFLSFPRAGDSPVQWIQLLHDALDQQGWPLLSPVKVQLQKCNKCSREFCSPINYRRHIRIQHRLKKLDKDSKKNRDLLGAYWDKLSIEEAKEVVSFKNVMLEEVPGSSILEALATLRKQGFSFPQYYLRAGSALLNIVQFRPSSFPISSQELFSILDDSSEKTFLGGSAVSMQRYVFDGEAGKIGLEPKNLVACTGFLLEQKLVKAWLADKDAEALRCQKLLVEEEEAAQKRKAEILERKRQKKLRQKEHKARERLEDDSEIKENTSCTGEDVSPAEASVVTCDFEAHNQEIFADRSPPLHVTSHCLVDEVVEGDRVSGYDCDTDQYIERQTSRGHNRRRTMAARWQGLPKSQWARANGSHACQNSQMSKLGVVQKHGTNRDQRAAPIVNGSKFWSRKPKPETNGVFLKAKLQKEPDKGKNHEVLIGSVSVSLGNCSHSESNSVAPQRDCLVENLAKQNTAQEKLGKLDFSQGGNARLTVKLWRPVSQHGTKDQLPLQNGGTEADVINGKYDQNLSSQSSLRLCSIDGSDIGLGDKFSHTGAKVDSESLGLSSHAAKAFLGQRWKEAISSNHVRLVVTPDFELLGGQQVQDCEFAACQSSNVERCSIRADAENRLPEETSSGVAKSKPRTKPEKGMKIKYIPKQKAAT 769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2245g00002 769 ProSitePatterns Zinc finger C2H2 type domain signature. 162 183 IPR013087 -
Mupr2245g00002 769 Coils Coil 355 375 - -
Mupr2245g00002 769 MobiDBLite consensus disorder prediction 371 387 - -
Mupr2245g00002 769 ProSiteProfiles Zinc finger C2H2 type domain profile. 160 188 IPR013087 -
Mupr2245g00002 769 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 87 768 - -
Mupr2245g00002 769 MobiDBLite consensus disorder prediction 363 392 - -
Mupr2245g00002 769 MobiDBLite consensus disorder prediction 729 769 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr2245g00002 Mupr-Chr2245 4278 10321 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr2245g00002 105 766 C2H2 Transcription Factor Family AT4G25610 43.548 4.01e-147 441
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mupr2245g00002 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr2245g00002 - - gmx:100799153 1108.59