Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2237g00001 ATGAATCCAACGACGAACTCTGGGGTGGCAGTGGCGCACAATTTTACTGCGCAGTGTCGTGTTTTGGAGTTGGGAAGTGCTATGAATTTCGGTGTGGAAATGTTTGGGGCGGGTAGAGGGCATGGGAGTGGTGGAGTTGTGGGACCGGTTTTGATTCCGAAGCGTTTCGTTTGGCCTCATGGAGGAAGAAAGGTGTTTCTGAGTGGTTCTTTCACGAGATGGTCGGCGTTTATACCTATGTCACCGATGGAAGGATGCCCGAGTGTATTTCAAGTTATTTGCAGCTTAACGCCAGGATATCATCAGTACAAATTTAATGTGGATGGTGAGTGGCGGCATGATGAGCATCAGCCATTGGTAAGGGGGGACTATGGGATAGTAAATACTATTTATTTAGTGAGAGAACCAGATATTTTGCGTCCTATCTTAAGTGCTGAAACACCTGGTCGATCCCACATGGAGGTTGACAATGATGTCTTCAGGCACGTGGAAGCTAATCCAAGGATGTTAGAGTCTGATCTGCAGGTCTCTCGACACCGTATATCTATATTCTTGTCTACAGATACTGCTTATGAGTTGGTTCCCGAGTCCGGCAAGGTTATTGCCTTGGATATAACTTTACCAGTTAAGCAAGCATTCCATGCTCTCTATCAAGAGGGAATATCTATGGCTCCTATATGGGATTCTAGCAAGTGCCAGTTTGTTGGAATGCTTAGTGCAATGGACTTCATTCTAATACTAAAAGAGCTGCGGATTCATGGATCAAACTTGACTGAAGAACAACTGGAGACACACACTATAGCAGCATGGAGAGAGGCAAAGGTACAAGAATGCAGAACTGATAGTAATGGGAGAACATACCCTCAACTTCTTGTTCATGTTGCAACCGTTCCTATCATCCATTCTTCTTCAGAGGATGGTTTCTTTCCTCAGCTGCTACACCTTGCTTCCCTCTCAGGAATACTAACATGTAAGCTTCTAGATTTATTGGCCAAGCATAAATGGTTTGGAACTAATCTACCAATTGGTTCGATACCTGTAGGTACATGGGTGTCAAAAGCGGGGGAATCGAATAAACAGCCACTTGCTGTGCTAAGGCCAAATGCTTCTCTTGCTAATGCTCTGTCTCTGTTGATTCAAGCTGAAGTTAGCTCAATACCGATTGTGGATGATAATGGTTCATTACTTGATGTATATTCAAGAAGAGATATTATTGCATTGGTTAAAGATAAAGCATATGCAAGGATAAGTTTGGATGGGTTTAGTATCCATCAGGCATTGCTTTTGGGACAAGAAGCAAAATTTCCTTACGGGCTTCGCAACGGCCCAAGATGCCATATGTGTTTGAGGTCTGATTCATTGCACAAAGTGATGGAGCGGTTGGCAAATCCTGGTGTTAGACGACTTGTGGTTGTGGAGGGGGGAAGCAGGCGTGTGGAA 1440 0.4431 MNPTTNSGVAVAHNFTAQCRVLELGSAMNFGVEMFGAGRGHGSGGVVGPVLIPKRFVWPHGGRKVFLSGSFTRWSAFIPMSPMEGCPSVFQVICSLTPGYHQYKFNVDGEWRHDEHQPLVRGDYGIVNTIYLVREPDILRPILSAETPGRSHMEVDNDVFRHVEANPRMLESDLQVSRHRISIFLSTDTAYELVPESGKVIALDITLPVKQAFHALYQEGISMAPIWDSSKCQFVGMLSAMDFILILKELRIHGSNLTEEQLETHTIAAWREAKVQECRTDSNGRTYPQLLVHVATVPIIHSSSEDGFFPQLLHLASLSGILTCKLLDLLAKHKWFGTNLPIGSIPVGTWVSKAGESNKQPLAVLRPNASLANALSLLIQAEVSSIPIVDDNGSLLDVYSRRDIIALVKDKAYARISLDGFSIHQALLLGQEAKFPYGLRNGPRCHMCLRSDSLHKVMERLANPGVRRLVVVEGGSRRVE 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2237g00001 480 SMART cbs_1 361 409 IPR000644 -
Mupr2237g00001 480 SMART cbs_1 199 248 IPR000644 -
Mupr2237g00001 480 PANTHER AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT 173 480 - -
Mupr2237g00001 480 Pfam Glycogen recognition site of AMP-activated protein kinase 52 137 IPR032640 -
Mupr2237g00001 480 Pfam CBS domain 361 408 IPR000644 -
Mupr2237g00001 480 Gene3D - 162 413 IPR046342 -
Mupr2237g00001 480 Gene3D Immunoglobulins 50 134 IPR013783 -
Mupr2237g00001 480 ProSiteProfiles CBS domain profile. 357 415 IPR000644 -
Mupr2237g00001 480 SUPERFAMILY E set domains 52 134 IPR014756 -
Mupr2237g00001 480 SUPERFAMILY CBS-domain pair 179 408 IPR046342 -
Mupr2237g00001 480 ProSiteProfiles CBS domain profile. 193 255 IPR000644 -
Mupr2237g00001 480 FunFam Sucrose nonfermenting 4-like protein 49 133 - -
Mupr2237g00001 480 CDD E_set_AMPKbeta_like_N 55 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr2237g00001 Mupr-Chr2237 1368 12909 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr2237g00001 56 143 Protein tyrosine phosphatase (PTP) family AT3G01510 36.667 8.53e-08 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr2237g00001 - - gmx:100790062 753.051