Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2229g00001 ATGGTTAGATTCCTTCGAGAGAGCAAAATGTCGGCTAACTGTGAGAAAATGGTAGTCATCCCTCCAACGACCAACCAATGGCCACAGGTGGATGATCACAAGGTCTTGATGGGTTCCACCGGTGGAAGTAACAACAAGGCAATGGAAAAACCAGGTGAAGAGCTTGTGCAGCAGCAGCAACAAGCCCTCAAGTGCCCTCGTTGCGACTCCTCAAACACCAAATTCTGCTACTACAACAACTACAGTTTGTCTCAGCCACGACACTTCTGCAAAGCCTGCAAGCGCTATTGGACAAGAGGTGGAACCCTCAGGAACGTTCCTGTTGGTGGAGGGTGCAGAAAAAACAAGCGTCTCAAGCGTCCCATAACAAACTCTTCTTCTGCCATTGACACTGCTTCTTCTTCTTCCTCTTCTGCTCTCACTGCTGCTTCACAACCCCAGATCGACACTGCCTCTACCTCAAATCACATCAACCCTTTGTTTTATGGGTTACCAAGTAGCTCTAGTGATGTGAATCTTCCGTTATTCCCTAGGTTCGGTTCCAGAATCTCCAGTTCCGGGTTTGATCTTCAGATGAATAATAATGCTCTTGGATTAGGTTTTTCTTCCCGGGTTATGTCCAATGAAGCTAGTGATCATAATAACGGTTATAGAAACGGGTTTGGTTCAAATAACACGCTTCTTTCAAGTTATAATTCCTTCTTTGGTTCTTCTTCGAGTTCTAGTTCCACCACTCCAGCTATGTCTTCTCTTTTGAGCTCTAATCTTCTGCAACAGAAGTTCATCAATTGTGGATTGAAAGATGGTGTTGGTGTTGATAGCAGCAACGCTTTTGAGCAGGGCTTAGGCTTAACCGCGCTAGAGCAGTTGCAAATGGGAAGTGATGGCAGTGAGGCAGGAATGGTGGCTTTAAAAGATGTGAAAGTGGAATTAGGACAAAGCAATAATAGGTTGGAGTGGAATGGTGCTTGCCAAAACCAGATCCAGCATGTGGGCTTGTACGATCCTTCGCTTTATTGGAATAATACAGCCACAGCTATGAGTGTTTGGAACGATCAAGCTGCTAATATTGGTTCATCAGTCACTTCTCTGATCTAG 1098 0.4517 MVRFLRESKMSANCEKMVVIPPTTNQWPQVDDHKVLMGSTGGSNNKAMEKPGEELVQQQQQALKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRKNKRLKRPITNSSSAIDTASSSSSSALTAASQPQIDTASTSNHINPLFYGLPSSSSDVNLPLFPRFGSRISSSGFDLQMNNNALGLGFSSRVMSNEASDHNNGYRNGFGSNNTLLSSYNSFFGSSSSSSSTTPAMSSLLSSNLLQQKFINCGLKDGVGVDSSNAFEQGLGLTALEQLQMGSDGSEAGMVALKDVKVELGQSNNRLEWNGACQNQIQHVGLYDPSLYWNNTATAMSVWNDQAANIGSSVTSLI 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2229g00001 365 MobiDBLite consensus disorder prediction 121 151 - -
Mupr2229g00001 365 ProSitePatterns Zinc finger Dof-type signature. 65 101 IPR003851 GO:0003677|GO:0006355
Mupr2229g00001 365 MobiDBLite consensus disorder prediction 112 151 - -
Mupr2229g00001 365 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 52 238 IPR045174 GO:0003700|GO:0006355
Mupr2229g00001 365 Pfam Dof domain, zinc finger 61 117 IPR003851 GO:0003677|GO:0006355
Mupr2229g00001 365 ProSiteProfiles Zinc finger Dof-type profile. 63 117 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr2229g00001 Mupr-Chr2229 9643 11138 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr2229g00001 63 365 C2C2-Dof Transcription Factor Family AT1G28310 40.867 5.36e-44 153
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Mupr2229g00001 zf-Dof 1.5e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr2229g00001 - - gmx:778098 513.842