Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2224g00001 ATGGCCTTAGATCACTTGGAGGAGACTGTGACCCAGAAAGAAAAGTGGAAATCTTCCAGTGAAGTCGTTGCAGATTCTGATAGAAATGGCTCTGGTGGCTTTGACTGCAACATATGCCTGGAGTGTGTGCAAGATCCAGTGGTCACACTTTGTGGTCATCTTTATTGCTGGCCCTGCATATACAAATGGCTTCATTTTCAAAGCACCTCTTTGGAAACTGAAGAGCAACAGAAGCCACAATGTCCAGTATGCAAATCAGAAGTTTCTCAATCCTCCCTAGTTCCATTATATGGCCGTGGCCTCACCACAATACCTTCTGAAGGGAAGCCACACCAAGTAGGGACTGTCATACCACAAAGACCTCAGGGTCCCATATCATTTAACACTACAAGGGTTTCCCAACCTATTTCTCGAAGTTATCACTCCTATAATCATTATCATCATCCTCAACAATTCAATTCAACTCCAAATGGTTATACCTCACCAATGCTTACCACAAGTGGTTCACTAGACAACACATTTGGAATCTTTGGTGGGATGATATATGCAAGGGTCTTTGGCAACCAGCTTGTTACAAGCCAACAAATAAGAGGATTCAGGATAGGAATGGCTTTGCTTATTGGCAAGGATAGACATAAATGCATAAAGCCTGCTGTTCGGAAGTCATGCTTATCTATTTCATGGGATGAAACAAGTTGCTGTGGTCCATACAATAAAATGCCAGCTTTAAGTTTTTTTAATGGTTTTCCAAGTTATGACTTCGCTAAATTAATGGGTCACTTTGCCCACAAGAGAAGGCATAGGAAATGGAGTATTCTCTATGTTTCAACCTTAACATATACGAAAACCTTTGTGACAAACAGTTACCAAGCCATGCCAATGCATGGAGTTGCTCCTGTATTTCAATTGTAA 912 0.4134 MALDHLEETVTQKEKWKSSSEVVADSDRNGSGGFDCNICLECVQDPVVTLCGHLYCWPCIYKWLHFQSTSLETEEQQKPQCPVCKSEVSQSSLVPLYGRGLTTIPSEGKPHQVGTVIPQRPQGPISFNTTRVSQPISRSYHSYNHYHHPQQFNSTPNGYTSPMLTTSGSLDNTFGIFGGMIYARVFGNQLVTSQQIRGFRIGMALLIGKDRHKCIKPAVRKSCLSISWDETSCCGPYNKMPALSFFNGFPSYDFAKLMGHFAHKRRHRKWSILYVSTLTYTKTFVTNSYQAMPMHGVAPVFQL 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2224g00001 303 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF5-RELATED 8 190 IPR045103 GO:0005783|GO:0006511|GO:0061630
Mupr2224g00001 303 FunFam E3 ubiquitin-protein ligase RMA1H1 isoform A 19 98 - -
Mupr2224g00001 303 ProSitePatterns Zinc finger RING-type signature. 51 60 IPR017907 -
Mupr2224g00001 303 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 6 106 IPR013083 -
Mupr2224g00001 303 Pfam RING-type zinc-finger 36 82 IPR027370 -
Mupr2224g00001 303 SMART ring_2 36 84 IPR001841 -
Mupr2224g00001 303 ProSiteProfiles Zinc finger RING-type profile. 36 85 IPR001841 -
Mupr2224g00001 303 SUPERFAMILY RING/U-box 35 91 - -
Mupr2224g00001 303 CDD RING-HC_AtRMA-like 34 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr2224g00001 Mupr-Chr2224 7584 9296 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr2224g00001 29 187 C3H Transcription Factor Family AT4G27470 45.029 8.51e-41 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr2224g00001 K10666 - gmx:100807729 334.339