Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2220g00007 ATGGCAGCTGAATTGGTGGGTGGAGCATTTCTCTCTGCTCTTGTCCAAACTTTGTTTCAGAAGATGGCCACACGTCAGATGGTAGATTTCATAAGGGGAGTAAAACATGACAATGGTCCTAACCTGCTTGACAAGCTGAAGATAACGTTGAGATCAGTTGATGCTTTGGTCAACTATGCTGAAGAGAGACAGACTACAGATTTGCACATAAGGGAATGGCTGAATGATCTCAAGGATGTCATGTTTAAGGCAGAAGACCTTTTGGATAAAATCAGTGTATTGGCTTCAAGCCAGAAACTGGAAGCTGATTCATGGAGTAGCAGCATAAGCAAGGTATGTTGCTCTTCACCTACTTCGCTTGGTGGCTTTAATGAAAGGATGGAGACCATTATAGAGAAAATTGAAAACCTTGTGAAACAAAAGGATGTTTTGGGTTTAAGGGAAGGTGTCAATGAGAAAGCATTTAAAAATTTTCAAACTACTTCTTTAGCTGGAAAATCTTCTATCTATGGAAGAAGTGCTGATAAGGATAATGTTATCAAACTTTTGCTATCAGTATCAGATGATAGTAGTGATGGGATATGTGTCATCCCCATAGTTGGTATGGGGGGAGTTGGGAAGACAACTCTTGCTCAACATGTGTACAATGATGACAAAGTAAAGCAGCATTTCAACATCAAAACATGGGTTTGTGTCAACCAGGAGTTTGATGTCTTCAAATTGACCAAGACCATTCTAGAGGCAATCCCTTTAACATGTGATACAATGGATCTCAATCTGCTACAAATTAAATTGAAAGAGTTCCTTCATAACAAGAGATTTTTAATTGTTTTAGATGATGTTTGGAACGAAAGCTATATTATGTGGGACATTTTAAGGCGACCATTTGAATTTGGTGCTTCAGGAAGTTGTGTCCTTGTAACAACCCGCAATGAACATGTTGCATCATCTATGCTTACAGTTCCAAGTTACCATTTAAAACCACTAGAAGATGATGATTGTTGGCTGCTGTTTTCTGAGCATGCATTTGAGGGGAGAGTATTCAACAAAAGTGCTGCACTGGATGATATTGGCAGGAAGATAGTGAAAAAATGCAGGGGGCTGCCATTGGCAGCAAAAGCTCTTGGAGGTCTCTTGCGGTCCAAAGTTGATTCAAGAGAATGGGTGAAGGTTCTGGAAAGTAAAATATGGGACTTTCCAAATGATAGGAGCAATATTCTTCCAGCTCTTATGTTGAGCTATTACTATCTTCCCTCAACTCTTAAGCGTTGTTTTGCTTATTGTTCCATATTTCCCAAACGTTACCAATTTCGACGAAAGGAATTAGTGCGCTTGTGGATGGCAGAAGATCTGCTGACACATCCCAAAGGAAATGGGAATTTGGAAGAACTTGGTACTGAGTACTTTGATGATCTAACATACAGATCATTCTTTATCAAATCAGGTAGAAGACGCTTTGTCATGCATGATCTCATCACAGATTTAGCTGAATTTGTTTCTGGAGAGTTCTCAATCAGATTGGACGGGCAGAAGAATAATTACCTATCAAAAAGAACTCGTCATTTGTCATATTCAAAGCTTCAGCTTGATGATTTGGAGAAAATAATGGCTACATGTGAAAATCTACGGACTTTTCTTCCATCACGAGTTTTGTCATGGCCAAGATGTTTGAACAATGAGGCTGTAGGCAAATTAATTTCAAAACATAGGAGTTTAAGGGTCCTTTCTCTCTCACACTGTGGTAATTTGACAGTTGTACCTGATTTCTTGGGTGACTTGATACATTTACGATATCTCAACCTTAGTGTCACTCCAATCTCCAAGTTACCGGAGTCCACATGTTCTCTGCATAATTTGCAGACTTTACTGTTGTTAAACTGTGTTTATCTTACTGAATTGCCACAGCAAATTGGAAGGCTGACCAACTTAAGGTGTTTGGATATTAGGGGAACAAAATTAAGTGAAATCCCACTTCATATGGGTACTATGACAAATCTTCAAACCTTAACTGGATTTGTCCTGGGTAGTGGAGGAGGGTCAGGCATTGAAGAGCTGAAGAATTTTCCCTTTCTTAAGGGAAAGATCTCTATTTCAAATCTCCAAAATATCATTGATCCACAAGATGCTATGAAGGATAGTTTGTTGAGAAATATGCAGCTTGATGGATTGATGTTGAGTTGGAGCACAAATGCAGATGATTCAAAAAATGTTAGAAACATACTGCATTGGTTGGAGCCTCCCAGGACCTTGAAGAAGCTTACCATTAGAAATTATGGTAGCACGTCATTCCCAGCCTGGTTTGGAGATTTTCAGTTCTCAAAATTAGTTTCTATCAGCCTTTTTGATTGTGTAAATTGTGTCCTTTTGCCAACACTGGGGCAACTGCCTTCCTTGAAAGCTCTCTCATTGGTGGGGTTTTCGAGTGTCATTTATGTTGATGGTATGTTTTACAACAATTCTTCGATGGAAGTGAAGCAATTTCAGCGACAAGATATTACACCATTTAAGTGCCTTGAGACTTTGCACTTTGAGAACATGCCTCAGTGGCAAGAATGGCTTCCTTTTGGGGAGGAAGAAAAGGAAGATGAAAAAAGAGCATTTCCTTGTCTTAAACAACTTTATATAAAAAAATGCCCAAAACTGAAAAGCGCAAACTTGATCCAAAAGCTACTGGCTCTAGAAAAGATTGTGATAGCAAAATGTGAACAGCTTGTAGTTGCAATTCCCCCAACAATTCGTGAATTGCAATTAGAATGTTGTGAGAAGGTTTCAGTCCAAAGGCCGCTGCCTCAATTATTGAACCTGACAATGAGTAGCTATAATGCAGTAGAGTCACTATTTGAGATGAATAAGCTGCTTCCATCCCTCGTGACTTTGAACATAAAAGAGTGTCCAGAACTCGAGTCATTTTCAGAAGGAGGTTTGCCAGATAGTCTGAACTTACTTGAGATATTTCATTGTGCTAAATTGTTTACCAACAGAAAGAACTGGAATTTGCAAAATCTCCCCTCTCTTAGAAGCTTTGCTATAGCAGGTTCATGCCAAGATGGGGAATCATTTCCAGAAAGATGGCTGCTGCCATCCACTCTTACATCCTTTCATATCCTTGCACTTTGGAATTTGGAGTATCTAGATGAGGACAGCCTTCAGCAACTGACCTCTCTGAAGACTTTGGGGATTGCACGCTGCCCAAAACTTCAGTGTATGCCAGCAAAGCTTCCTTCTTCGATTTCCACCCTTCATATCAGGACAAGTCCAAGACTTGAAGAAAGATGTAATGGAAAAAAAGCTGAAGATTGGCCGAAAATTGCTCACATTCCCATGATAAGGATTAACAAGAAATTAGATGGTGACCTTGGAGCAAAATTGTTTGTGATCATTGGCTTTGATCCAATTGGTGTAACAGAGGATTCCTCCCTCCTCTTGCTGTAA 3432 0.3957 MAAELVGGAFLSALVQTLFQKMATRQMVDFIRGVKHDNGPNLLDKLKITLRSVDALVNYAEERQTTDLHIREWLNDLKDVMFKAEDLLDKISVLASSQKLEADSWSSSISKVCCSSPTSLGGFNERMETIIEKIENLVKQKDVLGLREGVNEKAFKNFQTTSLAGKSSIYGRSADKDNVIKLLLSVSDDSSDGICVIPIVGMGGVGKTTLAQHVYNDDKVKQHFNIKTWVCVNQEFDVFKLTKTILEAIPLTCDTMDLNLLQIKLKEFLHNKRFLIVLDDVWNESYIMWDILRRPFEFGASGSCVLVTTRNEHVASSMLTVPSYHLKPLEDDDCWLLFSEHAFEGRVFNKSAALDDIGRKIVKKCRGLPLAAKALGGLLRSKVDSREWVKVLESKIWDFPNDRSNILPALMLSYYYLPSTLKRCFAYCSIFPKRYQFRRKELVRLWMAEDLLTHPKGNGNLEELGTEYFDDLTYRSFFIKSGRRRFVMHDLITDLAEFVSGEFSIRLDGQKNNYLSKRTRHLSYSKLQLDDLEKIMATCENLRTFLPSRVLSWPRCLNNEAVGKLISKHRSLRVLSLSHCGNLTVVPDFLGDLIHLRYLNLSVTPISKLPESTCSLHNLQTLLLLNCVYLTELPQQIGRLTNLRCLDIRGTKLSEIPLHMGTMTNLQTLTGFVLGSGGGSGIEELKNFPFLKGKISISNLQNIIDPQDAMKDSLLRNMQLDGLMLSWSTNADDSKNVRNILHWLEPPRTLKKLTIRNYGSTSFPAWFGDFQFSKLVSISLFDCVNCVLLPTLGQLPSLKALSLVGFSSVIYVDGMFYNNSSMEVKQFQRQDITPFKCLETLHFENMPQWQEWLPFGEEEKEDEKRAFPCLKQLYIKKCPKLKSANLIQKLLALEKIVIAKCEQLVVAIPPTIRELQLECCEKVSVQRPLPQLLNLTMSSYNAVESLFEMNKLLPSLVTLNIKECPELESFSEGGLPDSLNLLEIFHCAKLFTNRKNWNLQNLPSLRSFAIAGSCQDGESFPERWLLPSTLTSFHILALWNLEYLDEDSLQQLTSLKTLGIARCPKLQCMPAKLPSSISTLHIRTSPRLEERCNGKKAEDWPKIAHIPMIRINKKLDGDLGAKLFVIIGFDPIGVTEDSSLLLL 1143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2220g00007 1143 Pfam NB-ARC domain 175 393 IPR002182 GO:0043531
Mupr2220g00007 1143 Gene3D - 11 151 - -
Mupr2220g00007 1143 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 161 428 IPR027417 -
Mupr2220g00007 1143 SUPERFAMILY L domain-like 487 909 - -
Mupr2220g00007 1143 Gene3D - 152 321 IPR027417 -
Mupr2220g00007 1143 Gene3D - 328 412 IPR042197 -
Mupr2220g00007 1143 PANTHER DISEASE RESISTANCE PROTEIN RP 45 920 IPR044974 GO:0006952
Mupr2220g00007 1143 Gene3D Ribonuclease Inhibitor 974 1099 IPR032675 -
Mupr2220g00007 1143 SUPERFAMILY RNI-like 835 1075 - -
Mupr2220g00007 1143 PRINTS Disease resistance protein signature 365 379 - -
Mupr2220g00007 1143 PRINTS Disease resistance protein signature 268 282 - -
Mupr2220g00007 1143 PRINTS Disease resistance protein signature 567 583 - -
Mupr2220g00007 1143 PRINTS Disease resistance protein signature 196 211 - -
Mupr2220g00007 1143 Gene3D - 413 498 IPR036388 -
Mupr2220g00007 1143 FunFam Probable disease resistance protein At1g61300 152 321 - -
Mupr2220g00007 1143 Gene3D Ribonuclease Inhibitor 528 936 IPR032675 -
Mupr2220g00007 1143 Pfam Rx N-terminal domain 10 104 IPR041118 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr2220g00007 Mupr-Chr2220 85898 90622 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr2220g00007 194 818 WRKY Transcription Factor Family AT5G45050 25.037 1.92e-12 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr2220g00007 - - lja:Lj0g3v0087809.1 1536.16