Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2220g00004 ATGCTTACCCCTGTTTGTAAATTCTGTCATGCATCTGCACTTGAACCTGCAAATTACTTCCTTGTGGATGAGATCCAACATCACATATCTGGCAAGTGCCTAAAATCTATTTGGAACTTGAACATGTATGGGAGAAAAGCTTGCCAACTTGTGAAAGAATTTGCAAGTGGAGAAAAGGGCCAACTTACTTCATTCAATAGTGACATGTTTGAACAAGTAGTTGCAGAATGCAGTCAACATCACCTTGAGCTTCAGTCCTTGATAAGGAAGATACAGGAAGAAGGTTTGGATGTCCAAACGGCAAGAAATGCAGATCACTACGGAGCCCTTATCCACCATCTTGCTTTAGTCCGAAATAAACGTTGCTTAATGGCCTATGTGTATAATCGAGCAGAAATTGTACGAAGTTTGTTATGGAAGATAGGGCGTGTGCTTCCTCAAGAAATTGAAGAGAAGCTCTGTCATTTGGAGGAAGAATATTTCAAGAAGCATTCTACAGCATTGAAATCTTATATGTCGAAAGTGCTGGTTGATCTGACTGTGGATATGGTACCGCCAAAAGATCCTTACATCAAAGTAAGGGTCCTTGATGACATTGGAGAAGGCATTGTGCTTAGTGATGATAAGAGTGCCAATTTTGCCCGCCATTCAATGCACCTTTTGAAGCGCACTGATGCAGAGCAATTTATCTCACGGGTTAAGTTGTCTTGCAGCTTAGATTTATATTGCAAAATAGGCCTAATGGAGGAACTCACTGAAAAGTGCTCCGGAGTTCAAAATATGATTAAAAAGCTTTTGGAACTTAATTCACATATTTTGTATGAAGTCAGAAGTTCAAAAGATGTTCTCCACATACACTCAGCTCATCATCACACTGCCTCCACCGAGGTGATCTATTATAACTCTTCTTTTCTTTTTGGGTCAACAGCCACATTAACATACACTCTAAAGAAGGGAAACAGAACATCTTGGTCTGACTCCAGAGCCACACACCTTCAACTGAGGAATGTGCCAAAACTTCCTCATATAGGGTCA 1035 0.4048 MLTPVCKFCHASALEPANYFLVDEIQHHISGKCLKSIWNLNMYGRKACQLVKEFASGEKGQLTSFNSDMFEQVVAECSQHHLELQSLIRKIQEEGLDVQTARNADHYGALIHHLALVRNKRCLMAYVYNRAEIVRSLLWKIGRVLPQEIEEKLCHLEEEYFKKHSTALKSYMSKVLVDLTVDMVPPKDPYIKVRVLDDIGEGIVLSDDKSANFARHSMHLLKRTDAEQFISRVKLSCSLDLYCKIGLMEELTEKCSGVQNMIKKLLELNSHILYEVRSSKDVLHIHSAHHHTASTEVIYYNSSFLFGSTATLTYTLKKGNRTSWSDSRATHLQLRNVPKLPHIGS 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2220g00004 345 Coils Coil 248 268 - -
Mupr2220g00004 345 FunFam DNA replication complex GINS protein PSF1 42 175 - -
Mupr2220g00004 345 SUPERFAMILY GINS helical bundle-like 42 187 IPR036224 -
Mupr2220g00004 345 PANTHER PARTNER OF SLD5 42 235 IPR005339 GO:0000811|GO:0006260
Mupr2220g00004 345 CDD GINS_A_psf1 44 175 IPR005339 GO:0000811|GO:0006260
Mupr2220g00004 345 CDD GINS_B_Psf1 189 230 - -
Mupr2220g00004 345 Gene3D - 42 175 - -
Mupr2220g00004 345 Pfam GINS complex protein 87 157 IPR021151 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr2220g00004 42 252 Core DNA Replication Machinery Family AT1G80190 68.224 3.54e-102 297
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr2220g00004 K10732 - qsa:O6P43_027860 333.954