Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2204g00001 ATGGTCTTCTCAACTTCCTTTCTCCACGAAGATGGCCCCTTTTTTTCAAGAAAAAGGCCAAGAGTGTCAGATCTTGGACATCAAGATATAGATTTACTTGCGGATGCAGGAGTTTCCAGTGATATTTCCTTGTTCTCACATCAAAATACAGAGAGGAGTACTGGTGATGTCCCCTCTTCCAGCAATACTGATGATAAAGTTGATCCAGAGTCTGGAATGGAGATGAGCTGCCCGTCAAATGTTAATAGTGCCTATTTTCCTGTTTGTTCAACCACAGGAAATATTTCACAGATGGACCAGAGTTTCTGTGGCTATGTGCAACAGCCTGCTTTTGTGAGTGGATGGATGTATGTGAATGAAAATGGGCAAATGTGTGGTCCCTATATTAAGGAGCAGTTATATGAGGGCCTAACTACTGGTTTCTTGCCATCTGAGCTTCCTGTATATCCAGTGATTAATGGCACAATAATGAATGCTGTACCATTGAATTACTTCAAGCAGTTCCCTGATCATGTTTCCACTGGGTTTGCATATCTGAGTATGGGTATCTCAGGCACAAGGATGCCTACAATGGCAGTATATCAGCAAGATAGATCTTTTGAGCATGCTGCTCCTCTGGCTGTTAACCCTGATTCGCAGTCGCATGTCAATTACTGCATTAAGGAATCCAATCACTTAAATTCAAATTCAGAAGCATTCAACAGTTTAATATCTTGTCAGATGTTAGGTGAAGGATGCTGTTGGCTTTATGAGGATGAAAAGGGTATGAAATGTGGGCCACATTCTATTAATGAATTGGTTTCCTGGCATCGTCATGGATATCTTAAAGATTCAACAGTGATCTCTCATTATGACAAGAAGTATGGTACCTTTATGCTATTATCTGCTGTAAATGCATTAAAAGGAGATATCTCTGGAACTATTTGTATATCAGGTTCCACAAGTAATGAGGTTGGTGATATGGGAAACTTAATTAGTGAATTGTCTGAGAACATTTCTTCCCAATTGCACATGGGTATCATGAAAGCTGCCCGCAGAGTTGTGCTGGATGGAATTATTGGTGATATCATTGCAGAATTTGTTATGGAAAGGAAACGTAAGAGGCATAAGCTTGAATCAGCTGACCGTACCCCTGAAAACAAGATGTCTAAGTTTTCTGTGGAGATCAATAAAGGTTCTTCTATTCCCAGCGATCCATCATCTTCCCACATTTTGGATGATCAGACTTGTCATGAGAGTTCCAGACTGCCCTCAGCCAGTATTAAATCAGTTGGAAGCATTGACAATTTTTGGTGGTCATATGCTGTTATTCGCAAGGTACTTCTTGATTATTGCATGCAAGTCATGTGGAATGCAGTGTTTTTTGACATCATAGCAGAATACTTATCTTCCTGGAGGGTGAGGAAGCTTTGGTCTCATCCCCAGCCTCAACCATCTGCTAATGGATGTAAAGATCATGCTGAAAAGATTGAATCAGAAGCTTTGGTTCTCAAGCCAGATTCTTCTGACTGCAATACTGGTGACTATAATCAGTTTGGAGTAGTGGTGGCAGAAAGAAATCATCCTCAGTTATTTTCATCTCCTTGTAGTCTCAAAGGTGGAAACTTACTAGAAGGTCAAAATGTTCCATGCCCTTACCAAATCTCCAAAGATTTGACATGCATTCTTGAAAGTGTGGAGAATGAGCTTCACTTCTCTTCAACGATATCTTTAGCTGATTACATTCGAAGTTTTGTTGAAAAGGAAGTGAACAAATTAATTCCTTCCCCAGAAGAAAACATATTGAATAAGGTTGCTGTTAGTGACACTCGTTTTTCAGAGATACTTGCTGATAAAACATCTATGAAGGAAATTCCTAATGTGAAGTCTGTGGATCCTGTAAAAGCTGGAAATGCATTTGGCGGGTTTGCATCTGGAAACCATATGTCTGATGTGTTTTCAAAAGCATTTAAGGAGTTGTATGGATGTGTAGATGATGTGGTTGAAGAGGAGATTGATGACCTACCACCTGGACTTGAAGAGAAATATCAAACAGTTGTCCTGCACAATAATTCAAAATTTCGACCGTCAAGGTTGTTTGAATGTAATCCTAAGATTACAGAATATGTTGCAACTGCACTGTGCCGACAGAAACTGCATGATGAAGTTCTAGAAGAGTGGAAGTCGTTGTTTCTTGATTCTGTGCTCAATCAAGTTTTTATATCATCAAATACCATAAAAAAACATTTGAAGTTTGATGGTCATGAGAAAGGAAAAACATTCAATGCAAGCAAGGAACATTTAAATGGTGCTACTTCTGGACTGGGAAGAATGAAGGAAGGAGCAAAGAGTTCTTCTGAAGTACCTCTGGTGATTGGGAAGAAGTTTACCTATTGCCGCAAGAAGCAGTCACGGAAGGAGTTACTTTCCTCACAATCTGTGGCAGAAAATGATTCTAGGCCAGGGAAGCAGCCCATCGCCAAGTTAAGGAAACATGTCTCTGTAGATGTCGATGAGGCTGCAGAGGTTAAAATAACTTCTGTTAAATGTGGAAGGACTAAGATGATTAAAGGAAAGAAGGATACATCTTCTAAGGACAGGTCTTCTGTCAGTGTCAATAGTAGCTTACACAGTGATCAATTATCTTTAAAGAACAAAGCTGGTCAGAAAGTGTTGAAGTTTACAGATGACATTAAGGATGTTGTAAAGTCCAATGTAAAGAAGCTTTCAGTGTCAACTGATAATAGTGTTGGCATGAAGAAGGTTGTCAAAAGTGATGGCACTGTTAAAGAGAAGACCACCGGTCATTGCTCCAGAGAGATACAAAATGCAACGAAAAAAGTATCAAAATCAAAAAGGAAGCATCAAATGGATGGTACAGTATCTTCACATCCTACAAAGGTTTTGAAAATTTCAAATGGTGGTACTCATCTGGGAGCCAGTAAACAGGTTACTGTGGCAAGGAGGAAGTCTGCTAAATCCAAGCCATTGAATTTGTGTCCTAGATCTGATGGATGTGCTAGGACTTCTATTGATGGTTGGGAATGGCATAACTGGTCTCAAAGTGCCAGCCCTGCATGTAAAGCACGTATTAGGGGTCTTCCAACTGTCCAGAACAAGTGCATAGATTCTGAAAATAATATATCTCAGTTGTCAAATGGTAAGGGTCTTTCTGCAAGAACAAATAGAGTGAAATTGCGTAACCTTCTTGCTGCTGCAGAGGGTGCGGATCTTCTGAAAGTGCCTCAATTGAAGGCACGGAAGAAGCGTTTACGTTTTCAAAGGAGCAAGATCCACGACTGGGGTCTTGTTGCCTTGGAGCCAATTGAGGCAGAGGACTTTGTGATTGAGTATATTGGAGAACTAATTCGTCCTCGGATATCTGATATACGCGAACGTCAATATGAGAAGATGGGAATTGGAAGCAGTTACCTTTTTAGACTTGATGATGGTTATGTGGTTGATGCTACAAAGAGAGGTGGGATTGCAAGATTTATTAACCACTCTTGTGAGCCCAACTGCTATACAAAGGTTATATCTGTTGAGGGTCAAAAGAAGATTTTCATTTATGCGAAACGGCATATAGCTGCCGGTCAAGAAATTACATACAATTATAAGTTCCCCTTGGAGGAGAAGAAGATTCCCTGTAACTGTGGTTCCAGAAAGTTATGGATCAGCATCGCTGAACTGAATACTATTGGTGATTGGTATACAATTTGGATTGCCTGCTCGTTTGGTGATGAAATAATTGAGTGTCTTCTCTTAGAAGCTGTAAATAATTGTTTCCCTGTTTATACGATGTCGTTGAGAAATGCTGCGGCTGAAATAAGTGGCCACTATTTGATGTATCTACCTGCTAATAATGATGTTATTGGAATGTCTTATGAAAAGTGG 3873 0.3992 MVFSTSFLHEDGPFFSRKRPRVSDLGHQDIDLLADAGVSSDISLFSHQNTERSTGDVPSSSNTDDKVDPESGMEMSCPSNVNSAYFPVCSTTGNISQMDQSFCGYVQQPAFVSGWMYVNENGQMCGPYIKEQLYEGLTTGFLPSELPVYPVINGTIMNAVPLNYFKQFPDHVSTGFAYLSMGISGTRMPTMAVYQQDRSFEHAAPLAVNPDSQSHVNYCIKESNHLNSNSEAFNSLISCQMLGEGCCWLYEDEKGMKCGPHSINELVSWHRHGYLKDSTVISHYDKKYGTFMLLSAVNALKGDISGTICISGSTSNEVGDMGNLISELSENISSQLHMGIMKAARRVVLDGIIGDIIAEFVMERKRKRHKLESADRTPENKMSKFSVEINKGSSIPSDPSSSHILDDQTCHESSRLPSASIKSVGSIDNFWWSYAVIRKVLLDYCMQVMWNAVFFDIIAEYLSSWRVRKLWSHPQPQPSANGCKDHAEKIESEALVLKPDSSDCNTGDYNQFGVVVAERNHPQLFSSPCSLKGGNLLEGQNVPCPYQISKDLTCILESVENELHFSSTISLADYIRSFVEKEVNKLIPSPEENILNKVAVSDTRFSEILADKTSMKEIPNVKSVDPVKAGNAFGGFASGNHMSDVFSKAFKELYGCVDDVVEEEIDDLPPGLEEKYQTVVLHNNSKFRPSRLFECNPKITEYVATALCRQKLHDEVLEEWKSLFLDSVLNQVFISSNTIKKHLKFDGHEKGKTFNASKEHLNGATSGLGRMKEGAKSSSEVPLVIGKKFTYCRKKQSRKELLSSQSVAENDSRPGKQPIAKLRKHVSVDVDEAAEVKITSVKCGRTKMIKGKKDTSSKDRSSVSVNSSLHSDQLSLKNKAGQKVLKFTDDIKDVVKSNVKKLSVSTDNSVGMKKVVKSDGTVKEKTTGHCSREIQNATKKVSKSKRKHQMDGTVSSHPTKVLKISNGGTHLGASKQVTVARRKSAKSKPLNLCPRSDGCARTSIDGWEWHNWSQSASPACKARIRGLPTVQNKCIDSENNISQLSNGKGLSARTNRVKLRNLLAAAEGADLLKVPQLKARKKRLRFQRSKIHDWGLVALEPIEAEDFVIEYIGELIRPRISDIRERQYEKMGIGSSYLFRLDDGYVVDATKRGGIARFINHSCEPNCYTKVISVEGQKKIFIYAKRHIAAGQEITYNYKFPLEEKKIPCNCGSRKLWISIAELNTIGDWYTIWIACSFGDEIIECLLLEAVNNCFPVYTMSLRNAAAEISGHYLMYLPANNDVIGMSYEKW 1291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2204g00001 1291 CDD SET_SETD1 1070 1215 IPR037841 GO:0042800|GO:0048188
Mupr2204g00001 1291 MobiDBLite consensus disorder prediction 48 66 - -
Mupr2204g00001 1291 Gene3D - 105 175 IPR035445 -
Mupr2204g00001 1291 Gene3D - 238 327 IPR035445 -
Mupr2204g00001 1291 SUPERFAMILY GYF domain 243 300 IPR035445 -
Mupr2204g00001 1291 ProSiteProfiles SET domain profile. 1082 1199 IPR001214 GO:0005515
Mupr2204g00001 1291 MobiDBLite consensus disorder prediction 954 968 - -
Mupr2204g00001 1291 Gene3D SET domain 1073 1220 IPR046341 -
Mupr2204g00001 1291 ProSiteProfiles GYF domain profile. 245 295 IPR003169 GO:0005515
Mupr2204g00001 1291 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETD1 9 1215 IPR044570 GO:0042800|GO:0051568
Mupr2204g00001 1291 SMART set_7 1082 1205 IPR001214 GO:0005515
Mupr2204g00001 1291 MobiDBLite consensus disorder prediction 802 821 - -
Mupr2204g00001 1291 MobiDBLite consensus disorder prediction 937 968 - -
Mupr2204g00001 1291 MobiDBLite consensus disorder prediction 860 874 - -
Mupr2204g00001 1291 Pfam SET domain 1094 1198 IPR001214 GO:0005515
Mupr2204g00001 1291 MobiDBLite consensus disorder prediction 848 874 - -
Mupr2204g00001 1291 MobiDBLite consensus disorder prediction 48 74 - -
Mupr2204g00001 1291 SUPERFAMILY SET domain 1078 1214 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr2204g00001 Mupr-Chr2204 5342 29173 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr2204g00001 1081 1211 C2H2 Transcription Factor Family AT2G23740 36.601 2.86e-16 82.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Mupr2204g00001 SET 6.9e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr2204g00001 - - gmx:100805708 2027.68