Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2197g00003 ATGGAACTGAGCTTGGATTTGAGTTTGGCCTTTGTCCCAATAACCGTTTCTGAGATTCTTGGCGAGGTTTCTCAGAGCAAAGATGAGTCTCAGAGAATGGCCAAGCTTGAGGATTTTGTCAAAAGGTTGGAGGATGAGATGAGGAAGATCGAGGCCTTCAAACGCGAGCTTCCTCTTTGCATGTTCCTCGTAAAGGATGCTATGACTAGATTGAAAGAGGAAATAAACGGGAGTGTGAGAATGCAAGATGAATCTGTGGTTGAAGAATTGATGCCACTTGTGAAAACCGTTTCTCAAGAAAATGGATCTTTGACTGTGGACAAGGAAAGCAGTGACATGAAGAATTGGATGAACTCTGTTCATCTATGGAACGCTGAAACCAAACTGGGGAACGAAGAGGAAGATCGGTGTGTGCCCAACAATCCAATTGAACCGCAGAACGAGAGCAACGAGAGTGCAGGAGCATTCAATGGAAACAACAAGTGTGTCTCGAAGACAGTGATGAGGGATGAGAAGAAGGTGCCACAGGTTCCTAGGCTTGGTTTGATGAGTCCAGTGTTTGAATTGAATCATAGAAAAACAGAAAGTGGTTATGGACATGGTTCGTCTTTAAGTTCAGTTGAGTTTAAGGGTCAATCACAACCTCAGCAGAATCACAGGAAACAAAGGCGGTGCTGGTCACCAGAGCTTCATCGGCGATTTGTTGACGCGCTTCAACAATTAGGAGGACCACAAGTCGCTACTCCGAAGCAGATTAGAGAACTGATGCAAGTGGTAGGCTTGACAAATGATGAAGTGAAAAGCCATTTGCAAAAGTACAGGCTTCATTTTAGAAGGCCTCAAGTTTCTTCAGTTGGGCAAGCTAATAGTGGCTTATGCATGAAGGTACAAGAAAAATGTGGAGATAATAAATCAAAGGGAAATTTAACACAGTCTGGCTCTCCACAAGGTCCTCTCTTCCTAGGAGGGTCTGGCAAGGGTCTTTCAAGCTCTGGACGCAGCAACAGCACAGACACAGAAGAAGATGAGCAATCAGATTGCCGCAATTGGAAAGGTGGCCTTCACCACCAACCAGAACCTGACGTTTTATGA 1092 0.4478 MELSLDLSLAFVPITVSEILGEVSQSKDESQRMAKLEDFVKRLEDEMRKIEAFKRELPLCMFLVKDAMTRLKEEINGSVRMQDESVVEELMPLVKTVSQENGSLTVDKESSDMKNWMNSVHLWNAETKLGNEEEDRCVPNNPIEPQNESNESAGAFNGNNKCVSKTVMRDEKKVPQVPRLGLMSPVFELNHRKTESGYGHGSSLSSVEFKGQSQPQQNHRKQRRCWSPELHRRFVDALQQLGGPQVATPKQIRELMQVVGLTNDEVKSHLQKYRLHFRRPQVSSVGQANSGLCMKVQEKCGDNKSKGNLTQSGSPQGPLFLGGSGKGLSSSGRSNSTDTEEDEQSDCRNWKGGLHHQPEPDVL 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2197g00003 363 MobiDBLite consensus disorder prediction 196 221 - -
Mupr2197g00003 363 MobiDBLite consensus disorder prediction 193 226 - -
Mupr2197g00003 363 MobiDBLite consensus disorder prediction 336 363 - -
Mupr2197g00003 363 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 8 350 IPR044787 GO:0003700|GO:0006355
Mupr2197g00003 363 FunFam Myb family transcription factor 220 278 - -
Mupr2197g00003 363 Pfam Myb-like DNA-binding domain 223 274 IPR001005 -
Mupr2197g00003 363 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 218 278 IPR017930 -
Mupr2197g00003 363 MobiDBLite consensus disorder prediction 303 363 - -
Mupr2197g00003 363 NCBIfam myb-like DNA-binding domain, SHAQKYF class 221 276 IPR006447 GO:0003677
Mupr2197g00003 363 SUPERFAMILY Homeodomain-like 219 279 IPR009057 -
Mupr2197g00003 363 MobiDBLite consensus disorder prediction 303 318 - -
Mupr2197g00003 363 Coils Coil 26 56 - -
Mupr2197g00003 363 Gene3D - 220 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr2197g00003 Mupr-Chr2197 11989 13903 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr2197g00003 1 277 G2-like Transcription Factor Family AT4G37180 39.792 3.02e-51 170
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Mupr2197g00003 Myb_DNA-binding 8.2e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr2197g00003 - - gmx:100794220 431.795