Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2195g00003 ATGGAAGGGCAAGACAAAAAACACAAAGGCAAAGGCGTGTTGCAATATGAAAACTCTGGTGCCCATTTAAAAGTACTCATCGTAGATGGTGATAGGTTCACCCGACAGCTTCATGAAGAGCTGCTGCAAGGTGTTGGGGTGACAGATTATTTTTGTGTGGAAAATGGCCAACAAGCCGTGGAACTTCATTGGGAGGGTGAAAGTTTTGACCTAATTCTCATGGATTACAACATGCCTATCATGAATGGAATTGAGGCAACAAGGGAACTACGTTCAATGGGCATTTGTTGCAAGATTATTGGTGTGTCGTATTTATCCCGTAAAGCTGCAAAAGAATTTGTGGAAGCGGGGTTAGATGACTACTACAAGAAACCCTTCACTGATGACATGCTTAGTAAAATTCTTAATAAGATCACCGGAAAAGACAAAGGCAAAGGCGTAGTGATATATGAAAAGTGTGGCGCACAATTAAAAGTACTTGTCGTAGATGATGATAGGCACATCCGAAACCATTATGAAGTGCTTCTGACAAGAATTGGGGTGACGGATTTTGTTTCTGTGAAACACGGCCAAGAAGCCGTGGACCTTTGTCGCAATGGTGAAACATTTGACCTAATACTCATGGGTAAAGACATGCCTATCATGAATGGAACTTTGACAACAAAGGTACTACGTTCAATGGGCATTCGTAGCATTATTATTGGTTGGTCGTATGAATCTCGTGAAAATGTACAAGAATTTGTGGATGCGGGGTTAGATGACTACTACAAGTATCCCTTCTGCTGTGAAATACTTCATGAAATTCTTAGTCAAGTCAAGCCATTAAAACCAAGCAGCACTGCTTTCTTTTGA 852 0.4108 MEGQDKKHKGKGVLQYENSGAHLKVLIVDGDRFTRQLHEELLQGVGVTDYFCVENGQQAVELHWEGESFDLILMDYNMPIMNGIEATRELRSMGICCKIIGVSYLSRKAAKEFVEAGLDDYYKKPFTDDMLSKILNKITGKDKGKGVVIYEKCGAQLKVLVVDDDRHIRNHYEVLLTRIGVTDFVSVKHGQEAVDLCRNGETFDLILMGKDMPIMNGTLTTKVLRSMGIRSIIIGWSYESRENVQEFVDAGLDDYYKYPFCCEILHEILSQVKPLKPSSTAFF 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2195g00003 283 SUPERFAMILY CheY-like 23 139 IPR011006 -
Mupr2195g00003 283 ProSiteProfiles Response regulatory domain profile. 158 273 IPR001789 GO:0000160
Mupr2195g00003 283 CDD REC_hyHK_CKI1_RcsC-like 25 135 - -
Mupr2195g00003 283 SUPERFAMILY CheY-like 157 272 IPR011006 -
Mupr2195g00003 283 ProSiteProfiles Response regulatory domain profile. 24 139 IPR001789 GO:0000160
Mupr2195g00003 283 Pfam Response regulator receiver domain 159 263 IPR001789 GO:0000160
Mupr2195g00003 283 Pfam Response regulator receiver domain 25 135 IPR001789 GO:0000160
Mupr2195g00003 283 Gene3D - 4 145 - -
Mupr2195g00003 283 Gene3D - 150 276 - -
Mupr2195g00003 283 SMART REC_2 157 269 IPR001789 GO:0000160
Mupr2195g00003 283 SMART REC_2 23 135 IPR001789 GO:0000160
Mupr2195g00003 283 PANTHER TWO-COMPONENT RESPONSE REGULATOR 21 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr2195g00003 Mupr-Chr2195 22920 27897 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr2195g00003 140 272 Response Regulator Gene Family AT3G04280 36.029 2.63e-17 75.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mupr2195g00003 Response_reg 1.3e-12 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr2195g00003 - - var:108322984 139.813