Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2193g00007 GTTCTTCAGAATGATATTGATTTGTTAAATCCCCCAGTTGAGTTGGAGAAGAGAAAGCACAAGCTCAAGCGTCTTGTTCAGTCGCCAAATTCTTTCTTCATGGATGTTAAGTGCCAGGGTTGCTTCAATATAACCACTGTCTTTAGTCACTCTCAGACAGTTGTTGTATGCGGAAACTGTCAGACTGTTTTGTGCCAACCAACTGGTGGGCGGGCAAGGCTAACCGAAGGATGCTCTTTTAGAAAGAAGGGAGACTAA 258 0.438 VLQNDIDLLNPPVELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQTVLCQPTGGRARLTEGCSFRKKGD 85
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2193g00007 85 SUPERFAMILY Zn-binding ribosomal proteins 29 83 IPR011332 GO:0006412
Mupr2193g00007 85 ProSitePatterns Ribosomal protein S27e signature. 37 69 IPR000592 GO:0003735|GO:0005840|GO:0006412
Mupr2193g00007 85 FunFam 40S ribosomal protein S27 1 85 - -
Mupr2193g00007 85 PANTHER 40S RIBOSOMAL PROTEIN S27 1 85 IPR000592 GO:0003735|GO:0005840|GO:0006412
Mupr2193g00007 85 Hamap 30S ribosomal protein S27e [rps27e]. 23 83 IPR000592 GO:0003735|GO:0005840|GO:0006412
Mupr2193g00007 85 Gene3D - 4 84 IPR023407 -
Mupr2193g00007 85 Pfam Ribosomal protein S27 29 83 IPR000592 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr2193g00007 Mupr-Chr2193 13731 14502 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr2193g00007 1 85 Cytoplasmic Ribosomal Protein Gene Family AT3G61110 94.118 4.15e-58 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr2193g00007 K02978 - gmx:106797809 175.252