Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr218g00002 ATGGATACCAATAATCGGAGACCTAATCAAAGTACTGAAGCCAATATGGATAGTAGTGATTGGAGAAGTGGAATGCAGCATGAAACACGGCAAAGAATTGTCAGCAAAATAATGGACATGTTAAAAAGACATCTTCCTGTTTCTGGTCAAGAGGGAATGCATCAACTTTGGAAGATTGCCCAATGGTTTGAAGATAAGTGTTTTAATACTACAACAAGCCAGGCTGCATATCTAAGGAAAATATCTATAAAGATGCTTGTGTTGGAGGCTAGATACAAGGGCACCACGGCCAACGATATGCCTCCAAATCAAGGTGGCCTTAGCAATAAACCCTTTTGCTCTGTTCTCTTTAGTTGCCTAATTGCAATTTTGTTGCTGATTAATTGGTTTGGCAGATACAATACTGAACATAGGCAGTACTCCACTGCCAAAGAGGCCCAAGAAAGAGATGTGGCCAAGGATCTCATCCTTTTTGGTGCTTCTGAGAAGAAAAATTCCAACAACCTAGCCAAGGTGAGAATAGATCAGCAGAACCAAGGAATAATTTCTTTTTCTGATTCCATTCTACCTGATTGTGGATTAGAAGGGCTTAAAGCCATATTCACGACAGCAGTGCTAGTGTCAAAACCCCATTGCCATTCTTTGTTGTCTTCAATCGACACTGCAAAAGTAACTGCAATAAGGGCACCACATGATAGGCATAAGACATGTAGAATGACCAGTCATTTGAAGTGTGGAAAGCTTGTTTCCTTCTATATTTATGAAATTCAAGGAATGGTGGAAGAAGAAGCTGACTGCCGAATTTGTTTGCTTGAATTGAGAGGTGCTGATACCCTTAAAAAGGAGTGCAGCTGCAAAGGTGAACTTGCATTGGTCCACCAAGAGTGTGCAGTTAAATGGTTTAGCATTAAAGGCAACAGAACATGTGATGTGTGCAAGCGGGAGGTTCGGAATCTACCTGTCAGTATTGTGTACAAGTGA 981 0.4098 MDTNNRRPNQSTEANMDSSDWRSGMQHETRQRIVSKIMDMLKRHLPVSGQEGMHQLWKIAQWFEDKCFNTTTSQAAYLRKISIKMLVLEARYKGTTANDMPPNQGGLSNKPFCSVLFSCLIAILLLINWFGRYNTEHRQYSTAKEAQERDVAKDLILFGASEKKNSNNLAKVRIDQQNQGIISFSDSILPDCGLEGLKAIFTTAVLVSKPHCHSLLSSIDTAKVTAIRAPHDRHKTCRMTSHLKCGKLVSFYIYEIQGMVEEEADCRICLLELRGADTLKKECSCKGELALVHQECAVKWFSIKGNRTCDVCKREVRNLPVSIVYK 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr218g00002 326 FunFam Mediator of RNA polymerase II transcription subunit 15a 20 98 - -
Mupr218g00002 326 MobiDBLite consensus disorder prediction 1 22 - -
Mupr218g00002 326 Pfam RING-variant domain 266 312 IPR011016 GO:0008270
Mupr218g00002 326 PANTHER OS02G0165000 PROTEIN 260 323 - -
Mupr218g00002 326 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 256 321 IPR013083 -
Mupr218g00002 326 Gene3D Coactivator CBP, KIX domain 20 98 IPR036529 GO:0003712|GO:0006355
Mupr218g00002 326 ProSiteProfiles Zinc finger RING-CH-type profile. 258 319 IPR011016 GO:0008270
Mupr218g00002 326 MobiDBLite consensus disorder prediction 1 26 - -
Mupr218g00002 326 CDD RING_CH-C4HC3_MARCH 266 313 - -
Mupr218g00002 326 SMART ringv_2 265 313 IPR011016 GO:0008270
Mupr218g00002 326 Pfam KIX domain 19 93 IPR036546 -
Mupr218g00002 326 SUPERFAMILY RING/U-box 263 316 - -
Mupr218g00002 326 SUPERFAMILY Kix domain of CBP (creb binding protein) 19 89 IPR036529 GO:0003712|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr218g00002 Mupr-Chr218 16488 21584 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr218g00002 263 319 C3H Transcription Factor Family AT2G37950 47.458 4.01e-13 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr218g00002 - K14972 gmx:100783762 160.229