Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mupr218g00002 | ATGGATACCAATAATCGGAGACCTAATCAAAGTACTGAAGCCAATATGGATAGTAGTGATTGGAGAAGTGGAATGCAGCATGAAACACGGCAAAGAATTGTCAGCAAAATAATGGACATGTTAAAAAGACATCTTCCTGTTTCTGGTCAAGAGGGAATGCATCAACTTTGGAAGATTGCCCAATGGTTTGAAGATAAGTGTTTTAATACTACAACAAGCCAGGCTGCATATCTAAGGAAAATATCTATAAAGATGCTTGTGTTGGAGGCTAGATACAAGGGCACCACGGCCAACGATATGCCTCCAAATCAAGGTGGCCTTAGCAATAAACCCTTTTGCTCTGTTCTCTTTAGTTGCCTAATTGCAATTTTGTTGCTGATTAATTGGTTTGGCAGATACAATACTGAACATAGGCAGTACTCCACTGCCAAAGAGGCCCAAGAAAGAGATGTGGCCAAGGATCTCATCCTTTTTGGTGCTTCTGAGAAGAAAAATTCCAACAACCTAGCCAAGGTGAGAATAGATCAGCAGAACCAAGGAATAATTTCTTTTTCTGATTCCATTCTACCTGATTGTGGATTAGAAGGGCTTAAAGCCATATTCACGACAGCAGTGCTAGTGTCAAAACCCCATTGCCATTCTTTGTTGTCTTCAATCGACACTGCAAAAGTAACTGCAATAAGGGCACCACATGATAGGCATAAGACATGTAGAATGACCAGTCATTTGAAGTGTGGAAAGCTTGTTTCCTTCTATATTTATGAAATTCAAGGAATGGTGGAAGAAGAAGCTGACTGCCGAATTTGTTTGCTTGAATTGAGAGGTGCTGATACCCTTAAAAAGGAGTGCAGCTGCAAAGGTGAACTTGCATTGGTCCACCAAGAGTGTGCAGTTAAATGGTTTAGCATTAAAGGCAACAGAACATGTGATGTGTGCAAGCGGGAGGTTCGGAATCTACCTGTCAGTATTGTGTACAAGTGA | 981 | 0.4098 | MDTNNRRPNQSTEANMDSSDWRSGMQHETRQRIVSKIMDMLKRHLPVSGQEGMHQLWKIAQWFEDKCFNTTTSQAAYLRKISIKMLVLEARYKGTTANDMPPNQGGLSNKPFCSVLFSCLIAILLLINWFGRYNTEHRQYSTAKEAQERDVAKDLILFGASEKKNSNNLAKVRIDQQNQGIISFSDSILPDCGLEGLKAIFTTAVLVSKPHCHSLLSSIDTAKVTAIRAPHDRHKTCRMTSHLKCGKLVSFYIYEIQGMVEEEADCRICLLELRGADTLKKECSCKGELALVHQECAVKWFSIKGNRTCDVCKREVRNLPVSIVYK | 326 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mupr218g00002 | 326 | FunFam | Mediator of RNA polymerase II transcription subunit 15a | 20 | 98 | - | - | |
Mupr218g00002 | 326 | MobiDBLite | consensus disorder prediction | 1 | 22 | - | - | |
Mupr218g00002 | 326 | Pfam | RING-variant domain | 266 | 312 | IPR011016 | GO:0008270 | |
Mupr218g00002 | 326 | PANTHER | OS02G0165000 PROTEIN | 260 | 323 | - | - | |
Mupr218g00002 | 326 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 256 | 321 | IPR013083 | - | |
Mupr218g00002 | 326 | Gene3D | Coactivator CBP, KIX domain | 20 | 98 | IPR036529 | GO:0003712|GO:0006355 | |
Mupr218g00002 | 326 | ProSiteProfiles | Zinc finger RING-CH-type profile. | 258 | 319 | IPR011016 | GO:0008270 | |
Mupr218g00002 | 326 | MobiDBLite | consensus disorder prediction | 1 | 26 | - | - | |
Mupr218g00002 | 326 | CDD | RING_CH-C4HC3_MARCH | 266 | 313 | - | - | |
Mupr218g00002 | 326 | SMART | ringv_2 | 265 | 313 | IPR011016 | GO:0008270 | |
Mupr218g00002 | 326 | Pfam | KIX domain | 19 | 93 | IPR036546 | - | |
Mupr218g00002 | 326 | SUPERFAMILY | RING/U-box | 263 | 316 | - | - | |
Mupr218g00002 | 326 | SUPERFAMILY | Kix domain of CBP (creb binding protein) | 19 | 89 | IPR036529 | GO:0003712|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mupr218g00002 | Mupr-Chr218 | 16488 | 21584 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mupr218g00002 | 263 | 319 | C3H Transcription Factor Family | AT2G37950 | 47.458 | 4.01e-13 | 65.9 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mupr218g00002 | - | K14972 | gmx:100783762 | 160.229 |