Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2178g00003 ATGACAATATTGACCAACACTGTTAAACCAGAATGCTTGCTTCTGTCCCCAAGAATGCCTCGAAGAATACTCCAAGCAGAGGAACCTCCTTCATCCTCTGCAGATTTACAAATCTCCGCGCCACACCGCGACCCTGGAGTGTTCTTCTTCCTTGGAGGAATTGTAGTGCTCATCATATTGCTGATTCTTGTGTTTATATTTTGGAGGCGTATTAAACGGCCAGCAAAGATGATGGAGAACACAGCTCCAATAAGTCAGCAGCAAGGACCGATGGAGTTCTTTAGTGGAAACCTTCGGACAATTAGCTACTTTGACTTCCGGACATTGAGGAGGGCCACTAAGAATTTCCATCCTAAAAAGCTTCTGGGAAGTGGTGGATTTGGGCCTGTCTATCAGGGAAAGTTGGCAGATGGAAGGCTTGTTGCAGTAAAGACATTGTCACTTGACAAGTCTCACCAAGGAGAAAGAGAATTTCTGGCAGAAGTGAGAATGATCACAAGCATCCAACACAAGAATCTGGTTCGCCTTCTGGGATGTTGCACAGATGGGCCTCAAAGGATACTTGTGTACGAATACATGAAGAACAGAAGTTTGGACCTTATAATATATGGAAAGAGTGATCAATTTCTGAATTGGAGCACTAGATTCCAAATTATTCTTGGAGTAGCACGGGGATTGCAATACCTCCACGAGGATTCACATTTAAGAATTGTCCACCGAGACATCAAAGCAAGCAACATTCTTCTTGATGACAAGTTTCAGCCGAGGATTGGAGACTTTGGGCTAGCTAGGTTCTTCCCTGAAGACCAAGCTTACCTTAGCACTCAGTTCGCAGGAACATTAGGTTATACAGCTCCTGAGTATGCAATTAGAGGAGAATTGTCGGAAAAGGCAGACATCTATAGTTTTGGAGTTCTTGTGCTTGAAATCATCAGTTGCAGGAAAAACACAGATCTTAGTTTACCATCAGAAATGCAGTACCTCCCTGAATATGCATGGAAACTTTACGAGAAGTCAATGTTGATGAAAATTGTTGATCCAAAGCTTGGAGAGCATGGCATAGAAGAAAAGGATGTTATGCAAGCATTCCACGTGGCCTTATTATGCCTTCAGCCACACGCGGATTTGAGACCTGCCATGTCAGAGATAGTGGCATTGTTGACATTCAAAGCTGAAATGGTTACAACACCAATGAAGCCAGCCTTCATAGATCGAAGGCGCGTAATGGATGATGAGAAGCACTCATGGGAAGCCATATCCGAGGCTTTCACAACTGCATCTGTCAAATAA 1290 0.4364 MTILTNTVKPECLLLSPRMPRRILQAEEPPSSSADLQISAPHRDPGVFFFLGGIVVLIILLILVFIFWRRIKRPAKMMENTAPISQQQGPMEFFSGNLRTISYFDFRTLRRATKNFHPKKLLGSGGFGPVYQGKLADGRLVAVKTLSLDKSHQGEREFLAEVRMITSIQHKNLVRLLGCCTDGPQRILVYEYMKNRSLDLIIYGKSDQFLNWSTRFQIILGVARGLQYLHEDSHLRIVHRDIKASNILLDDKFQPRIGDFGLARFFPEDQAYLSTQFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLSLPSEMQYLPEYAWKLYEKSMLMKIVDPKLGEHGIEEKDVMQAFHVALLCLQPHADLRPAMSEIVALLTFKAEMVTTPMKPAFIDRRRVMDDEKHSWEAISEAFTTASVK 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2178g00003 429 ProSiteProfiles Protein kinase domain profile. 116 389 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr2178g00003 429 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 193 397 - -
Mupr2178g00003 429 Pfam Protein tyrosine and serine/threonine kinase 119 386 IPR001245 GO:0004672|GO:0006468
Mupr2178g00003 429 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 35 413 - -
Mupr2178g00003 429 Gene3D Transferase(Phosphotransferase) domain 1 193 400 - -
Mupr2178g00003 429 ProSitePatterns Serine/Threonine protein kinases active-site signature. 237 249 IPR008271 GO:0004672|GO:0006468
Mupr2178g00003 429 SUPERFAMILY Protein kinase-like (PK-like) 95 390 IPR011009 -
Mupr2178g00003 429 CDD STKc_IRAK 122 388 - -
Mupr2178g00003 429 SMART serkin_6 116 394 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr2178g00003 429 FunFam Cysteine-rich receptor-like protein kinase 10 80 192 - -
Mupr2178g00003 429 Gene3D Phosphorylase Kinase; domain 1 76 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr2178g00003 Mupr-Chr2178 19521 22302 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr2178g00003 104 403 Receptor kinase-like Gene Family AT1G56120 49.667 1.45e-100 317
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mupr2178g00003 PK_Tyr_Ser-Thr 1.6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr2178g00003 - - ccaj:109792436 729.554