Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2171g00001 ATGGGTGACACAGTTGGTGAAGTAGCGAGCAAGAGGGGAAGGGGCAGAAGGGCCCTGAAGGAAAAAGCCCTATCAACAAATGAGGCCAACATCGTAGCTGGAAATGTTTGTGAGTCCTCAACCACACCAAAGAAACAAGAATCCAAGAAGCAGCAATCTTTTGAGAAAGAGATGCTGGAGATGCAGGGAATGCTGCAGCAATTGCGCCTCGAGAAGGAGAAGACCCAAGAGCTCTTGAAAGCCAAAGACGAAGCTCTCAAGCAGAAGGACCAAGAACTCGAAAACCGTGACCGCCAACAAGAAAAGCTTCAGTTTGAGCTCAAAAAATTGCAGAAGTTGAAGGAGTTTAAACCTACCATGAATTTGCCTGTGTTGAAAGATAATGAACAAAAGAAGGATAAAAAGAAGAAAGGGTGCTCTGAGATGAAAAGGCCTTCTCCGCCTTACATTTTGTGGATGAAAGATCAGTGGAACGAGGTTAAAAAAGAGAATCCAGAGGCAGAATTTAAGGAAATTTCCAACATGCTGGGGGCTAAGTGGAAGACTGTTAGTGCAGAAGAGAAGAAGCCTTATGAGGAGAAATACCATGCTGAGAAAGAAGCTTATTTGCTAGTGATTGCAAAGGAAAAACGCGAGAGTGAGGCAATGAGGTTGCTAGAAGAGGAGCAGAAGCAGAGGACTGCTATGGAATTGCTTGAACAGTACATGCAATTCAAACAAGGGGCAGAGAAAGACAGCAAGAAGAGCAAAAAGGAGAAGGATCCATTGAAACCAAAGCACCCCATGTCAGCTTATTTCTTGTTCACTAACGATAGGCGAGCAGCTCTTATTGCCGAGAACAAGAATTTCTTGGAGGTTCCAAAAATCACAGGTGAAGAGTGGAAAAACATGACAGAAGAACAAAAGAGACCATATGAAGAGATGGCAAAGAAGAACAAGGAGAAATATGCCCTAGAAATGGAGGCTTATAAACAGAAAAAAGATGAAGAGGCTGCCCATCTCATTAAGGAAGAGGAGGAGCATATGAAACTTCAGAAACAAGAAGCCTTGCAGCTGCTGAAGAAGAAGGAGAAAACTGAAAATATAATCAAGAAAACAAAACAGAATCGTCAGAAGAAGAAACAAAACAAGGAAGACAAGAATTATGATCCAAACAGGCCAAAAAGGCCCCCATCCTCATTCCTCTTATTCAGCAAAGAAGCAAGGAAAACTTTACAGGAGGAGCGACCAGGAGTGAACACCTCAACCCTGAATGCACTTGTCTCGTTGAAGTGGAAGGAACTGAGTGAGGAAGAGAGACAATTCTGGAATGGACAAGCATCTAAAGCTATGGATGCATACAAGAAGGAATTGGAGGAATACAACAAAACCCTCGCTGCAATTGCAAGCCAGGACCAGAAAATCGAAGAATAA 1413 0.4303 MGDTVGEVASKRGRGRRALKEKALSTNEANIVAGNVCESSTTPKKQESKKQQSFEKEMLEMQGMLQQLRLEKEKTQELLKAKDEALKQKDQELENRDRQQEKLQFELKKLQKLKEFKPTMNLPVLKDNEQKKDKKKKGCSEMKRPSPPYILWMKDQWNEVKKENPEAEFKEISNMLGAKWKTVSAEEKKPYEEKYHAEKEAYLLVIAKEKRESEAMRLLEEEQKQRTAMELLEQYMQFKQGAEKDSKKSKKEKDPLKPKHPMSAYFLFTNDRRAALIAENKNFLEVPKITGEEWKNMTEEQKRPYEEMAKKNKEKYALEMEAYKQKKDEEAAHLIKEEEEHMKLQKQEALQLLKKKEKTENIIKKTKQNRQKKKQNKEDKNYDPNRPKRPPSSFLLFSKEARKTLQEERPGVNTSTLNALVSLKWKELSEEERQFWNGQASKAMDAYKKELEEYNKTLAAIASQDQKIEE 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2171g00001 470 ProSiteProfiles HMG boxes A and B DNA-binding domains profile. 387 455 IPR009071 -
Mupr2171g00001 470 MobiDBLite consensus disorder prediction 239 261 - -
Mupr2171g00001 470 MobiDBLite consensus disorder prediction 1 22 - -
Mupr2171g00001 470 CDD HMG-box_AtHMGB6-like_rpt1 143 210 - -
Mupr2171g00001 470 MobiDBLite consensus disorder prediction 355 386 - -
Mupr2171g00001 470 SUPERFAMILY HMG-box 130 204 IPR036910 -
Mupr2171g00001 470 MobiDBLite consensus disorder prediction 126 142 - -
Mupr2171g00001 470 ProSiteProfiles HMG boxes A and B DNA-binding domains profile. 142 210 IPR009071 -
Mupr2171g00001 470 SUPERFAMILY HMG-box 245 331 IPR036910 -
Mupr2171g00001 470 Coils Coil 437 464 - -
Mupr2171g00001 470 Coils Coil 51 113 - -
Mupr2171g00001 470 SMART hmgende2 141 211 IPR009071 -
Mupr2171g00001 470 SMART hmgende2 386 456 IPR009071 -
Mupr2171g00001 470 SMART hmgende2 257 325 IPR009071 -
Mupr2171g00001 470 ProSiteProfiles HMG boxes A and B DNA-binding domains profile. 258 324 IPR009071 -
Mupr2171g00001 470 MobiDBLite consensus disorder prediction 119 147 - -
Mupr2171g00001 470 Gene3D High mobility group box domain 365 468 IPR036910 -
Mupr2171g00001 470 Gene3D High mobility group box domain 241 339 IPR036910 -
Mupr2171g00001 470 Gene3D High mobility group box domain 126 236 IPR036910 -
Mupr2171g00001 470 SUPERFAMILY HMG-box 382 459 IPR036910 -
Mupr2171g00001 470 MobiDBLite consensus disorder prediction 240 259 - -
Mupr2171g00001 470 PANTHER HIGH MOBILITY GROUP B PROTEIN 13 7 463 IPR044601 GO:0003677
Mupr2171g00001 470 Pfam HMG (high mobility group) box 387 455 IPR009071 -
Mupr2171g00001 470 Pfam HMG (high mobility group) box 258 324 IPR009071 -
Mupr2171g00001 470 Pfam HMG (high mobility group) box 143 203 IPR009071 -
Mupr2171g00001 470 Coils Coil 306 376 - -
Mupr2171g00001 470 MobiDBLite consensus disorder prediction 355 411 - -
Mupr2171g00001 470 MobiDBLite consensus disorder prediction 34 54 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR HMG Mupr2171g00001 HMG_box 2.2e-15 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr2171g00001 K09273 - gmx:100783033 677.937