Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2169g00005 ATGCATGGTAATGTTCCAAAATGTGAATGCTTGAAAGGGTATGTTCCTAAATTCCCTGAACAATGGAATATATCGTATTGGTTTAGCGGCTGTGTTACGAGGAATAAATCTATATGCAAAAACAATAACACAGATAGCTTTTGGAGGTACACAAACATGAAATTGCCAGACTCATCTTCATCATGGTTTAATAAGACCATGAAGCTTGAGGAGTGTCAGAAGTTGTGTTTGAAAAACTGTTCTTGTTCGGCGTGTGCAAATTTAGATATCCGAAGTGGAGGAAGTGGCTGTCTACTTTGGTTTGATGATCTGGTTGACATGAGGAGATTCTCTCAATGGGGACAAGACCTTTACATCAGAGTCCCTGCTTTAGAACTTGATAATAGCCATGGAAACATGAAGAACAAGATCGTAGGAATCACAATTGGTGTGATCATTTTTGGACTTATTGCGTGTGTCTCCAGAATAATACTCGGAAAGCAAGGAGTGTATTGTTATCTCCCCTCATTTCAACGGCGGGAAGAATATTCTAGACTGAGGAAGGAAGACATTAACCTGCCAATATTTGATTTGTCAACCATTGCTAAAGCTACCAATAATTTTTCTAGCATAAATAAACTAGGGGAAGGTGGATTTGGGCCAGTGTATAAGGGTACACTGATAGATGGGCTAGAGGTAGCTATAAAAAGAAACTCAAAGATGTCTGATCAAGGATCGGAGGAATTTAAAAATGAAGTTATCACCGAAAAATCTCATGAAGCTTCTTGGTTGCTGCATTCCAAAATCTCAGACTTTGGCTTGGCTTGGACTTTCGGTGGTTATCAAATTGAAAGCAAAACAAAAAGAGTGGTTGGAACATATGGTTACATGCCTCCAGAGTATGCTGTACATGGTCGTTACTCTCTCAAATCAGATGTCTTTAGTTTTGGTGTAATTGTACTTGAGATAGCATGGAGACTCTGGACCGAAGACAGGCCATTGGAACTAATAGGTAAACAGTTACGCGAAAAATGCAATTTTTGTGAAGTCCTACGTTGCATGCATGTGGGTTTGTTATGTGTACAACAAAAAAAAGAAGACAGACCTGACATGTCCTCCGTCATTCTTATGATGAATGGTGAGAAATTATTGCCTCGGCCAAAGGCTCCAGGATTTTATACTGGAAGAGGTTTACCTGAATCAGTATCTTCTTCTAGAATGTTTAATCTGTTATCTACAAATGAGATATACATAATTTCAACATAA 1245 0.3863 MHGNVPKCECLKGYVPKFPEQWNISYWFSGCVTRNKSICKNNNTDSFWRYTNMKLPDSSSSWFNKTMKLEECQKLCLKNCSCSACANLDIRSGGSGCLLWFDDLVDMRRFSQWGQDLYIRVPALELDNSHGNMKNKIVGITIGVIIFGLIACVSRIILGKQGVYCYLPSFQRREEYSRLRKEDINLPIFDLSTIAKATNNFSSINKLGEGGFGPVYKGTLIDGLEVAIKRNSKMSDQGSEEFKNEVITEKSHEASWLLHSKISDFGLAWTFGGYQIESKTKRVVGTYGYMPPEYAVHGRYSLKSDVFSFGVIVLEIAWRLWTEDRPLELIGKQLREKCNFCEVLRCMHVGLLCVQQKKEDRPDMSSVILMMNGEKLLPRPKAPGFYTGRGLPESVSSSRMFNLLSTNEIYIIST 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2169g00005 414 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 31 - -
Mupr2169g00005 414 SUPERFAMILY Protein kinase-like (PK-like) 186 394 IPR011009 -
Mupr2169g00005 414 Gene3D Hepatocyte Growth Factor 38 118 - -
Mupr2169g00005 414 Pfam Protein tyrosine and serine/threonine kinase 260 368 IPR001245 GO:0004672|GO:0006468
Mupr2169g00005 414 SMART ntp_6 42 121 IPR003609 -
Mupr2169g00005 414 Gene3D Phosphorylase Kinase; domain 1 167 254 - -
Mupr2169g00005 414 ProSiteProfiles PAN/Apple domain profile. 39 122 IPR003609 -
Mupr2169g00005 414 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 6 362 - -
Mupr2169g00005 414 Pfam PAN-like domain 39 107 IPR003609 -
Mupr2169g00005 414 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 38 121 - -
Mupr2169g00005 414 Gene3D Transferase(Phosphotransferase) domain 1 255 376 - -
Mupr2169g00005 414 CDD PAN_AP_plant 40 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr2169g00005 Mupr-Chr2169 21397 25709 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr2169g00005 189 386 Receptor kinase-like Gene Family AT4G23280 39.044 1.29e-49 175
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mupr2169g00005 PK_Tyr_Ser-Thr 5.1e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr2169g00005 - - tpra:123915364 388.267