Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2166g00001 ATGGAATCTATGTTTCAAGAAGAAGGGTCATCTTCTGTAACTTCTTCACCTCTACAGTTCTTTTCCATGATGTCACTCTCACCCGGCATAGGATCTCCCTATCCTTGGCACAGAGAACTGAAATCTGAGGAAAGGGGTTTGTGTTTGATCCATTTGTTGCTCACTTGTGCAAATCATGTAGCTGCTGGTAGTCTTGAAAATGCAAACATCATACTTGAGCAGATTTCACACCTTGCCTCTCCCGATGGGGATACTATGCAGCGAATTGCTGCATATTTTAGTGAAGCACTTGCTGATCGAATACTCAAAACATGGCCTGGCCTCCACAGGGCCCTTAATTCCACCCGAATAGTTTTGGTTTCTGAAGAAATTCTTGTTCAGAAGCTCTTCTTTGAGCTATTCCCCTTCTTGAAGGTGGGATATATTCTGACAAATCAGGCTATTGTTGAAGCCATGGAAGGGAAGAAAATGGTGCATATAATTGATCTCAATGCCGCCGAGCCCGCACAGTGGATTGCTCTCTTCCAAGTTCTGAGTGCTCGTCCCGAGGGCCCTCCCCATTTGAGAATTACTGGGGTTCATCAGCAGAAAGAGGTTTTGGATCAGATGGCTCATAAACTCACTGAAGAAGCAGAAAAGTTGGATATCCCCTTCCAATTCAACCCACTGGTCACCAAGTTAGAAAATCTTGATTTTGATAAACTTCGCGTGAAAACTGGGGAGGCTCTAGCAATAAGTTCTATTCTTCAGTTACACTCCCTTTTGGCCTTGGATGACGAGGCCTCCCGGAGAAAGTCACCTCTTCTGTCAAAACATTCAAATTCAATTCACCTGCAGAAAGTCCTGCTCATGAACCAAAACTCACTAGGTGATTTGCTTGAAAAGGATATGGCTAATGGCTATAGCCCAAGTCCTGATTCAGCCTCATCCTCGCCTGCATCCTCAACTGCTTTGATGAATTCCGAGAGCTTTCTTAATGCCTTGTGGGGGTTATCACCAAAGGTCATGGTTGTAACTGAACAAGATTCTAATCACAATGGTTCGACCCTGATGGAGCGCCTGCTAGAAGCTCTATATTCCTATGCTGCATTGTTTGATTGTTTGGAATCCACTGTCTCAAGAACATCCTTGGAGAGAATAAAGATTGAGAAGATGCTTTTTGGCGAGGAAATCAAGAACATCATAGCCTGTGAGGGAGCTGAAAGAAAGGAAAGACATGAGAAGATGGAGAAATGGATCCAAAGACTTGATTTGTCTGGCTTTGCCAACGTGCCTTTAAGCTACTGTGGCATGTTGCAAGCAAGGAGGTTCCTTCAGAGCTATGGTTGTGAGGGGTATAGAATGAGGGAGGAAAATGGTTGTGTAATGATTTGCTGGCAGGACCGATCCTTGTTCTCTATAACAGCTTGGAGATCAAGGAATGGGAGGTTTATTCTCAAGAATATTTTAAATCATCTTATAATATCTTCTAAAAAAATCCTCTTAAACGCTTAG 1494 0.4337 MESMFQEEGSSSVTSSPLQFFSMMSLSPGIGSPYPWHRELKSEERGLCLIHLLLTCANHVAAGSLENANIILEQISHLASPDGDTMQRIAAYFSEALADRILKTWPGLHRALNSTRIVLVSEEILVQKLFFELFPFLKVGYILTNQAIVEAMEGKKMVHIIDLNAAEPAQWIALFQVLSARPEGPPHLRITGVHQQKEVLDQMAHKLTEEAEKLDIPFQFNPLVTKLENLDFDKLRVKTGEALAISSILQLHSLLALDDEASRRKSPLLSKHSNSIHLQKVLLMNQNSLGDLLEKDMANGYSPSPDSASSSPASSTALMNSESFLNALWGLSPKVMVVTEQDSNHNGSTLMERLLEALYSYAALFDCLESTVSRTSLERIKIEKMLFGEEIKNIIACEGAERKERHEKMEKWIQRLDLSGFANVPLSYCGMLQARRFLQSYGCEGYRMREENGCVMICWQDRSLFSITAWRSRNGRFILKNILNHLIISSKKILLNA 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2166g00001 497 Pfam GRAS domain family 49 471 IPR005202 -
Mupr2166g00001 497 ProSiteProfiles GRAS family profile. 40 471 IPR005202 -
Mupr2166g00001 497 MobiDBLite consensus disorder prediction 295 315 - -
Mupr2166g00001 497 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 45 466 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr2166g00001 Mupr-Chr2166 1617 3736 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr2166g00001 1 473 GRAS Transcription Factor Family AT1G50420 68.116 0.0 664
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Mupr2166g00001 GRAS 2.4e-138 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr2166g00001 - - cave:132164091 775.393