Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2165g00002 ATGGCAATCTCCCTCTCCCAAAACTCCCTCATCTCTACTCCTGAGGCCTATTCTACTAGTCCTGGCATGAAACTTGTCATTATCAATGTGTCTTCTGGTAGTGATGTCATTGAGTCTATCATTGATTTTGCCCGTCGGGGCCATGTCATCCTCAGGATCCTTAGTGTCACTGGCTTGATCTCTAGTGTCACCCTTTGCAACACGCTCCACGCCGCACCCGCACTCACACTCCATGGACCTTTCACCTTACTCTCTATCACTAGTCCATGTATCTTCAATAACCAATACATCCATCACCAAATAGCCACCCCTTCTTCTCCTATTTCCTTCAAAATGAGCCTCTCCTCCTCCCAAGGCCAGGTCTTTGGTGGCATCATCGATGGTAGAGTTATTGCTGCTAACGATGTCACCATTGTGGCCTCCATTTTAAGGAACCCTGAGTTGTACATGTACGTCCCTAAAGAAGAAGGAGAGGAACATGGTGACAATAATAATAACAACAATCCTAGTCATATCAATAGGAGTGTCGACATTTCGAGTTATGCATAG 549 0.4572 MAISLSQNSLISTPEAYSTSPGMKLVIINVSSGSDVIESIIDFARRGHVILRILSVTGLISSVTLCNTLHAAPALTLHGPFTLLSITSPCIFNNQYIHHQIATPSSPISFKMSLSSSQGQVFGGIIDGRVIAANDVTIVASILRNPELYMYVPKEEGEEHGDNNNNNNPSHINRSVDISSYA 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2165g00002 182 MobiDBLite consensus disorder prediction 156 182 - -
Mupr2165g00002 182 CDD DUF296 27 142 IPR005175 -
Mupr2165g00002 182 Pfam Plants and Prokaryotes Conserved (PCC) domain 26 142 IPR005175 -
Mupr2165g00002 182 ProSiteProfiles PPC domain profile profile. 19 164 IPR005175 -
Mupr2165g00002 182 SUPERFAMILY AF0104/ALDC/Ptd012-like 22 149 - -
Mupr2165g00002 182 MobiDBLite consensus disorder prediction 163 182 - -
Mupr2165g00002 182 Gene3D - 23 161 - -
Mupr2165g00002 182 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 20 166 IPR014476 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr2165g00002 Mupr-Chr2165 11233 12676 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr2165g00002 19 160 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 36.111 1.87e-18 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr2165g00002 - - gmx:100818645 164.851