Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2160g00004 ATGAAGTCCGCGCGGGTCAAAGAAACGGCGATTCCGTTAGTGTTGTTCAGTCTGGTCTTAGCCATTGCAGGTTCGGATCTAGCTTCGGACAGAGCGGGGCTGTTACTACTCCGAAGCGCGGTTGGGGGACGCACGCTGCTATGGAACACGAGCCAAACGAGTCCTTGTTTGTGGACCGGCGTGTCCTGCACCAGCGGGAGAGTAACCATGCTGCGCCTCCCCGCGATGGGCCTCTCCGGTTCGCTTCCCTCCGGTTTGGGCAACCTCACCGAACTGCAGACACTCTCCCTCCGGTTCAACGCGCTAACCGGACGAATTCCCGCCGATTTCGGCCAACTAAAAGCGCTGAGAAACCTCTACCTACAGGGAAACTTCTTCTCCGGCGAAGTTTCCGATGCGGTGTTCGCCTTGCAGAACCTCGTGAGGCTGAATTTAGGTAACAATAATTTCAGCGGCGAGGTTTCGCCCAACTTCAATAGCCTCGCTCGTTTGGACACTCTTTATCTACAAAGCAACAATTTCACCGGCTCCATCCCTGACTTCACCGTTCCACCTCTGCATCAGTTTAACGTGTCGTTTAACCGTTTAACCGGTTCCATTCCGGCGCGGTTTTCGCGCATGAACCAAAGCGCGTTCGCCGGCAACTCGCTCTGCGGGAGGCCCTTGCAACTCTGCACCGGAACGGGGGAGAAGCATAGTAAATTATCCGGCGGCGCCATTGCTGGTATTGTCATTGGTTCTTTGTTCGGCGTGTTGTTGATTCTGCTCCTTTTGTTTTTGTTGTGTAGAAAAAGGAGAGAGAAAAACGATAACGAAAGTCTCCCTCCTGGGAAGCGTGTTGTGGAAGGTGAAGTGTCTCGTGAAAAGAGCAGCGAGAGTGGTGCGAATTCAGGTTCGGCGGTGGCAGGTTCGGTGGAGAAGAGTGAGGTTCGGAGTAGTGGTGGTGGGGACAAGAGTTTGGTGTTCTTCGGGAATGTGAATAGAGTGTTTAGTTTGGATGAGTTGTTGAGGGCTTCGGCTGAAGTGTTGGGGAAAGGCACGTTTGGAACGACTTATAAGGCCACCTTGGAGATGGGGGCTAGTGTGGCGGTGAAAAGGTTGAAGGATGTTACTGCGACAGAGAGAGAATTCAGGGAGAGGATTGAGCAAGTGGGGAAGATGGTTCATCATAACTTGGTCCCACTTAGGGGTTATTACTTTAGCAGGGATGAGAAGCTTGTTGTGTATGATTACATGCCCATGGGAAGCTTATCTGCTCTTTTACATGCAAATGGTGGAGTGGGGAGGACTCCACTGAATTGGGAAACAAGGTCTGCCATTGCCCTTGGTGCTGCCCGTGGGATTGCATACCTTCATTCCCAAGGCCCAACATCCTCCCATGGAAACATCAAGTCATCGAATATCCTTCTCACCAAATCTTTTGAAGCTCGTGTCTCTGACTTTGGCCTTGCATACCTTGCTCTCCCGACCTCTACGCCAAACCGTGTTTCTGGTTACCGTGCACCGGAGGTCACTGATGCGCGCAAAGTATCCCAAAAAGCTGATGTCTATAGCTTTGGTATCATGCTCTTGGAGCTGCTAACAGGGAAGGCTCCCACTCATTCTTCACTGAATGAAGAAGGGGTGGACCTCCCAAGATGGGTCCAATCTGTGATTCAAGATGAGTGGAACACTGATGTATTTGACATGGAGCTTCTAAGGTACCAGAGTGTTGAGGAGGAAATGGTCAAGCTTTTGGAGCTTGCCCTTGAATGTACTGCTCAATATCCTGACAAGAGACCTTCAATGGATGTGGTGGCAAGCAAGATTGAGGAAATTTGTCACCAGAAAGAGGAAGGGAAGAATCATGATTTTAAAGATGCAGATATTGGACTTTCCCAACAGTACTACTCTCTTGACTCG 1902 0.5079 MKSARVKETAIPLVLFSLVLAIAGSDLASDRAGLLLLRSAVGGRTLLWNTSQTSPCLWTGVSCTSGRVTMLRLPAMGLSGSLPSGLGNLTELQTLSLRFNALTGRIPADFGQLKALRNLYLQGNFFSGEVSDAVFALQNLVRLNLGNNNFSGEVSPNFNSLARLDTLYLQSNNFTGSIPDFTVPPLHQFNVSFNRLTGSIPARFSRMNQSAFAGNSLCGRPLQLCTGTGEKHSKLSGGAIAGIVIGSLFGVLLILLLLFLLCRKRREKNDNESLPPGKRVVEGEVSREKSSESGANSGSAVAGSVEKSEVRSSGGGDKSLVFFGNVNRVFSLDELLRASAEVLGKGTFGTTYKATLEMGASVAVKRLKDVTATEREFRERIEQVGKMVHHNLVPLRGYYFSRDEKLVVYDYMPMGSLSALLHANGGVGRTPLNWETRSAIALGAARGIAYLHSQGPTSSHGNIKSSNILLTKSFEARVSDFGLAYLALPTSTPNRVSGYRAPEVTDARKVSQKADVYSFGIMLLELLTGKAPTHSSLNEEGVDLPRWVQSVIQDEWNTDVFDMELLRYQSVEEEMVKLLELALECTAQYPDKRPSMDVVASKIEEICHQKEEGKNHDFKDADIGLSQQYYSLDS 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2160g00004 634 MobiDBLite consensus disorder prediction 269 314 - -
Mupr2160g00004 634 FunFam Probable inactive receptor kinase RLK902 27 182 - -
Mupr2160g00004 634 SUPERFAMILY Protein kinase-like (PK-like) 341 601 IPR011009 -
Mupr2160g00004 634 Pfam Protein kinase domain 340 598 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr2160g00004 634 Gene3D Phosphorylase Kinase; domain 1 306 411 - -
Mupr2160g00004 634 MobiDBLite consensus disorder prediction 269 289 - -
Mupr2160g00004 634 Pfam Leucine rich repeat N-terminal domain 28 63 IPR013210 -
Mupr2160g00004 634 PANTHER OS05G0588300 PROTEIN 14 608 - -
Mupr2160g00004 634 Gene3D Ribonuclease Inhibitor 138 228 IPR032675 -
Mupr2160g00004 634 FunFam Probable inactive receptor kinase At1g48480 412 615 - -
Mupr2160g00004 634 Gene3D Ribonuclease Inhibitor 37 137 IPR032675 -
Mupr2160g00004 634 Gene3D Transferase(Phosphotransferase) domain 1 412 630 - -
Mupr2160g00004 634 CDD STKc_IRAK 343 606 - -
Mupr2160g00004 634 FunFam pollen receptor-like kinase 1 306 411 - -
Mupr2160g00004 634 ProSitePatterns Protein kinases ATP-binding region signature. 343 365 IPR017441 GO:0005524
Mupr2160g00004 634 ProSiteProfiles Protein kinase domain profile. 337 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr2160g00004 634 SUPERFAMILY L domain-like 48 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr2160g00004 Mupr-Chr2160 32458 35173 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr2160g00004 26 606 Receptor kinase-like Gene Family AT1G48480 56.515 0.0 672
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Mupr2160g00004 Pkinase 2.6e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr2160g00004 - - gmx:100801103 1021.54