Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2158g00006 ATGGAGTTGTTCTGTGACAATAACTTAGCTATTAGTATTGCCCATAATCCAGTCCAACACGACAGAACAAAGCACATACAGATAGACAGACACTTCATTAAAGAGAAGTTGGATAGTGGACTTATAGTCATAGCACGCATTCCTACGAGACTCCAAGTGGCAGATATTTTCATCAAAGAGCTCCTTGTAGCTAGATTTCAAGAACTCTGGCAAGTAGCTGTTGCTCTTTCGCATGCTGCAATCTTAGAAGAGTCAATGAGGGCAAGGGATCAGCTCATGGAGCAGAATATTGCATTGGATCTAGCAAGAAGAGAAGCAGAAACTGCAATTCGTGCTCGGAATGACTTTTTGGCTGTTATGAACCACGAGATGAGAACTCCCATGCATGCAGTTATTGCACTCTCTTCATTACTTCAGGAAACAGATTTGACAGCTGAGCAACGTCTGATGGTGGAGACAATATTGAAAAGCAGCAATTTGTTGGCTACCCTCATCAATGATGTTTTGGATCTTTCACGACTTGAAGATGGCAGTCTTCAACTTGAATCAGCAACATTTAACCTTCATTCTTTATTTAGAGAGGTCCTTAACTTGATTAAGCCTGTTGCATATGTTAAAAAGTTATCACTCACTTCACATTTAGCTTCAGATTTGCCAATGTATGCTATTGGTGACGAAAAGCGTCTCATGCAAACTATTCTGAATGTTGTTGGTAATGCTGTTAAGTTCTCAAAAGAGGGCTGCATTTCCATCACTGCTTTTGTTGCGAAGCCTGAATCCTTTAGAGATGCTAGAATTCCTGACTTTCTTCCAGTGCCAACTGATAGCCACTTTTATTTGCGAGTACAGGTAAAAGATTCGGGATCAGGAATTAATCCACAAGATATCCCGAAGTTATTCACTAAGTTTGCACAAAACCAATCATTAACAACAAGAAATCCTGCTGGAAGTGGACTTGGCCTGGCGATCTGTAGGAGGTTTGTAAATCTCATGGAAGGGCATATTTGGATTGAAAGTGAGGGTATTGGTAAAGGATGTACAGTCACTTTTATTGTAAAACTTGGAATCCCAGATCGATCAAATGAATTTAAGCTACCTTTTGTACCTAAATTCCTGGGAAATCATGGATCTACAAACTTTGCTGGGCTCAAGGTTCTTCTCATGGATGACAATGGGGTTAGCAGGACAGTATCGAAGGGACTTCTTTTGCATTTAGGGTGTGATGTTACAACTGCTAGCTCTAGTGAAGAATGTCTGCGTGTTGTTTCTCTGGAACATGAAGTGGTCTTCATGGATGTTTGTACATGGTTAGGTGGTTATGAACTAACAGTACGTTTACATGAGAAGTTTACGAAACATCAAAGTAGACCACTAATAGTTGCTCTTACTGGAAACAACAAAAAGGTTACAAAAGATAACTGTATGAGGGTTGGTATGGATGGCCTTATATTGAAACCTGTTTCTGTTGACAAAATGAGGGGTGCTTTATCAGAACTCTTGGAGCGCCGAGTTCTGTTCGAAACTGTTTAA 1530 0.402 MELFCDNNLAISIAHNPVQHDRTKHIQIDRHFIKEKLDSGLIVIARIPTRLQVADIFIKELLVARFQELWQVAVALSHAAILEESMRARDQLMEQNIALDLARREAETAIRARNDFLAVMNHEMRTPMHAVIALSSLLQETDLTAEQRLMVETILKSSNLLATLINDVLDLSRLEDGSLQLESATFNLHSLFREVLNLIKPVAYVKKLSLTSHLASDLPMYAIGDEKRLMQTILNVVGNAVKFSKEGCISITAFVAKPESFRDARIPDFLPVPTDSHFYLRVQVKDSGSGINPQDIPKLFTKFAQNQSLTTRNPAGSGLGLAICRRFVNLMEGHIWIESEGIGKGCTVTFIVKLGIPDRSNEFKLPFVPKFLGNHGSTNFAGLKVLLMDDNGVSRTVSKGLLLHLGCDVTTASSSEECLRVVSLEHEVVFMDVCTWLGGYELTVRLHEKFTKHQSRPLIVALTGNNKKVTKDNCMRVGMDGLILKPVSVDKMRGALSELLERRVLFETV 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2158g00006 509 Gene3D - 177 361 IPR036890 -
Mupr2158g00006 509 PANTHER TWO-COMPONENT SENSOR HISTIDINE KINASE 71 502 - -
Mupr2158g00006 509 CDD HisKA 110 173 IPR003661 GO:0000155|GO:0007165
Mupr2158g00006 509 Gene3D - 377 509 - -
Mupr2158g00006 509 Pfam His Kinase A (phospho-acceptor) domain 113 177 IPR003661 GO:0000155|GO:0007165
Mupr2158g00006 509 FunFam Ethylene receptor 377 509 - -
Mupr2158g00006 509 Pfam Response regulator receiver domain 385 496 IPR001789 GO:0000160
Mupr2158g00006 509 FunFam Ethylene receptor 1 79 175 - -
Mupr2158g00006 509 CDD RNase_HI_RT_Ty1 1 61 - -
Mupr2158g00006 509 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 98 178 IPR036097 GO:0000155|GO:0007165
Mupr2158g00006 509 PRINTS Bacterial sensor protein C-terminal signature 315 333 IPR004358 GO:0016310|GO:0016772
Mupr2158g00006 509 PRINTS Bacterial sensor protein C-terminal signature 280 294 IPR004358 GO:0016310|GO:0016772
Mupr2158g00006 509 PRINTS Bacterial sensor protein C-terminal signature 298 308 IPR004358 GO:0016310|GO:0016772
Mupr2158g00006 509 ProSiteProfiles Response regulatory domain profile. 384 500 IPR001789 GO:0000160
Mupr2158g00006 509 ProSiteProfiles Histidine kinase domain profile. 119 356 IPR005467 -
Mupr2158g00006 509 SMART HisKA_10 112 177 IPR003661 GO:0000155|GO:0007165
Mupr2158g00006 509 SUPERFAMILY CheY-like 379 502 IPR011006 -
Mupr2158g00006 509 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 166 354 IPR036890 -
Mupr2158g00006 509 SMART REC_2 383 496 IPR001789 GO:0000160
Mupr2158g00006 509 SMART HKATPase_4 224 356 IPR003594 -
Mupr2158g00006 509 FunFam Ethylene receptor 1 177 359 - -
Mupr2158g00006 509 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 224 354 IPR003594 -
Mupr2158g00006 509 Gene3D - 75 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr2158g00006 Mupr-Chr2158 19187 23518 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr2158g00006 71 507 Miscellaneous Gene Families AT1G66340 73.804 0.0 649
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mupr2158g00006 HATPase_c 9.4e-31 CL0025
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr2158g00006 K14509 - gmx:100795340 806.979