Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2130g00004 ATGAATTCTTCTGGCTACGAACAAGAACAACAACATGACTACGCCCCATCTCAAACTCAAACTCAAACTCAAACTCCATCCTATGATCAATCATCACAGCCTTATTATGCCTATAATTATGCACACGATAACCAACAAGACCCCACTTCGCTCCCAATCGTCCCTGAACTGCTTCGTTCTGCCGAACCCTCACACACCCTCGCGCTGAACCCGGTCCAGGCTGCGCCGGTTGCCGGTCTCAACCCCGCCGCAGTGGCAGTCGTAGCGGGAGCCCTCGCGCAGCTTGTAGGGAACGTTGACCGGGTGCCAAGGGAACCGTTAAAGCAGCTTGGTCTCTGTTCCATGTCGCTTCCAACAAAGCTCTCTCCCAATCTATGCTCAGCTACAATTGGCTTTCTGAAGATTGCAATGATGACCGGGCCATCTCAATACAGGGGTAGAGGTCGTGGGGGTGGTAGACCGTTTAGAGGCAGTGGTCGTGGCCGATTCAATCATCACCGTGGTAGGGGACGTGGCAGGGGTGGCGATGGTAGAGAGTTCTCATCTCATTCTTCTGAACCCACTATTGCTAATGTAGCAGATGTGCCTGCTGCTGATGGGGCCACTTCAGTGATGCAACCATCATCAGTCTCTGGGCAATCATCATTACCTAATCCAGCAGAAGTGCCCTCTGCACCATTGCAAGCACCACCATGCAAGTTATGGTGTGAAATTTGTAAGGCCGAGTGTAATACTCCAGAAATGTTGGAGCAGCATAAGAATGGAAAGCGGCATAGAAAGAATTTGCTTGTGCATGAAGAAGTACAAAGACTCAAAGTTTTAAGTGAACAACAGAGTGGAAATATTTCTACTTCTCAATCGAATTTAACAATCCAACCTGAGAAAGTTCAGGAATCTGAGAACAAAGGATTACCAGAAGAAAATATGGGTTCTGAAGCTACAGCTAATAATCACAATGATGAAACTGAGCTTCAGAATAATGTAGCAGGGGTTTCTAAAGTTCAAACTGAAGAGCCTCAAGAGGAACCTAGATACAACTTTGCCATACAGGGTCATGGATTCAAGCGTAAGATGAGAGGAGGCAGAGGAGGTAAATACATGAGGAGTGATGATGGATCAAGAAAACCAGTGGAACCTTCAAAGCCTAAGCAGGTTACATCTTTCATATGTGAGTTGTGCAATGTTAAATGTGATTCCCAGGTTGTCTATAATAGTCATTTGACAGGAAAAAAGCACTTATCAAATTTCAAGCGAGTCCATGGCCACCAAGCTTTGAATGGAGAAGCATGGATCCAACCACTTCACCCTCCTAAGATCAATCCTCTGTCAAATGTAAATAATTTTACAGTCCAAGGTGTTAATGTCCCACATCACATTAATGATCCCCGGAACCTTCTGGCTCAGCTGCTGATGACTGTGCTGTCCAATGTCCAAATACCGGCACCTCCGGCCACTCAGATACATGCACCAGCATTGATGGCTGGATCAAGTCATGAACCCCTATCCCAAAATTTGTCACAGACACAAGTCTCAGATTCCTTGGCACATTTTGAGACTGAAAATTCTACTGGGAAAACAAAAGATCAGATGTCATCTGTCACCTTGCAGCTGGAAGAGACTGCAGGTTCAAGTGATAATGGTAACACTGAGACTGCGGATGGAGGACCCGCAAAGGAAGAAACAGCAATGAAACTTCCCCACAATAGTTCAACTATGACACCATCAGAAAACCCAGTTGCAGAAAATAAACAAGTACCTTCATAA 1764 0.458 MNSSGYEQEQQHDYAPSQTQTQTQTPSYDQSSQPYYAYNYAHDNQQDPTSLPIVPELLRSAEPSHTLALNPVQAAPVAGLNPAAVAVVAGALAQLVGNVDRVPREPLKQLGLCSMSLPTKLSPNLCSATIGFLKIAMMTGPSQYRGRGRGGGRPFRGSGRGRFNHHRGRGRGRGGDGREFSSHSSEPTIANVADVPAADGATSVMQPSSVSGQSSLPNPAEVPSAPLQAPPCKLWCEICKAECNTPEMLEQHKNGKRHRKNLLVHEEVQRLKVLSEQQSGNISTSQSNLTIQPEKVQESENKGLPEENMGSEATANNHNDETELQNNVAGVSKVQTEEPQEEPRYNFAIQGHGFKRKMRGGRGGKYMRSDDGSRKPVEPSKPKQVTSFICELCNVKCDSQVVYNSHLTGKKHLSNFKRVHGHQALNGEAWIQPLHPPKINPLSNVNNFTVQGVNVPHHINDPRNLLAQLLMTVLSNVQIPAPPATQIHAPALMAGSSHEPLSQNLSQTQVSDSLAHFETENSTGKTKDQMSSVTLQLEETAGSSDNGNTETADGGPAKEETAMKLPHNSSTMTPSENPVAENKQVPS 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2130g00004 587 MobiDBLite consensus disorder prediction 1 42 - -
Mupr2130g00004 587 MobiDBLite consensus disorder prediction 202 221 - -
Mupr2130g00004 587 Pfam Zinc-finger of C2H2 type 388 412 - -
Mupr2130g00004 587 Pfam Zinc-finger of C2H2 type 235 258 - -
Mupr2130g00004 587 SMART ZnF_U1_5 385 419 IPR003604 GO:0003676|GO:0008270
Mupr2130g00004 587 SMART ZnF_U1_5 233 265 IPR003604 GO:0003676|GO:0008270
Mupr2130g00004 587 MobiDBLite consensus disorder prediction 275 297 - -
Mupr2130g00004 587 MobiDBLite consensus disorder prediction 355 381 - -
Mupr2130g00004 587 SUPERFAMILY beta-beta-alpha zinc fingers 219 262 IPR036236 -
Mupr2130g00004 587 MobiDBLite consensus disorder prediction 275 322 - -
Mupr2130g00004 587 SMART c2h2final6 388 412 IPR013087 -
Mupr2130g00004 587 SMART c2h2final6 234 258 IPR013087 -
Mupr2130g00004 587 SUPERFAMILY beta-beta-alpha zinc fingers 373 419 IPR036236 -
Mupr2130g00004 587 PANTHER OS06G0651300 PROTEIN-RELATED 9 502 - -
Mupr2130g00004 587 MobiDBLite consensus disorder prediction 363 378 - -
Mupr2130g00004 587 MobiDBLite consensus disorder prediction 143 188 - -
Mupr2130g00004 587 MobiDBLite consensus disorder prediction 538 587 - -
Mupr2130g00004 587 MobiDBLite consensus disorder prediction 201 226 - -
Mupr2130g00004 587 Gene3D Classic Zinc Finger 368 418 - -
Mupr2130g00004 587 Gene3D Classic Zinc Finger 224 265 - -
Mupr2130g00004 587 MobiDBLite consensus disorder prediction 564 587 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr2130g00004 Mupr-Chr2130 16803 23274 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr2130g00004 374 412 C2H2 Transcription Factor Family AT5G61190 48.718 3.84e-06 48.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mupr2130g00004 zf-met 3.7e-06 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr2130g00004 - - gmx:102666037 742.651