Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2130g00001 ATGGAGAAGCACAAGTGCAAGCTTTGCTTCAGGAGCTTCTCCAATGGGAGAGCCTTGGGGGGTCACATGCGGTCTCACATGATGAACCTTCCTCTCTCAAAGCCCGAAGAAGCCTTATCGCGAACCATCCAACTCAGTTTCGAAGCCGAATCAGCGTCATCATCATCATCCGATGATGACGACGACGACAAGGGTCTTTCGTATGGCCTCAGAGAGAACCCCAAGAGAAGCATTCGCCTCGTGGATCCCGAATTTTCGTTCGCAGCTGCAGACACTGGCTCCGTGATCCTCCAAGACAGAGAGAGCGAGTCCGAGTCATCCAAGAACAACCCAACTCGTAGAAGATCCAAAAGGCCATGGAATAATAATAATTATTACAATAATAATAATAATAATAATAATAATAATAATAATATTAATAATAATAATAATGATAACACCAACAGCCACAGCAACAAGAGGCAAGTTCTCGGTCAGAAGAGTAAGACAGAATCGTGGGTGGACCACGAGCCTGCGAGTTCGGTTTCCGATGCAACCACCGAGGAAGACGTGGCATTTTGTCTCATGATGCTGTCGAGGGACAAATGGAAGAGACAAAAGGATCAACCACAATTGGTGGAACTGGAAGATCAATACGAGGAAGAGGAAGAGGAGGAGGAGGAGGAGGAGGAAGAGGAAGATGAGGCATTCGAAGAGAGCGAGGAATCTCAAGAGACGATGAAACTATGCAAGAACCGAGTGCGGGGAAGGTACAAATGCGAGACCTGCGACAAGGTGTTCCGATCTTACCAAGCATTGGGGGGTCACAGAGCCAGTCACAAGAAGATCAAAGTGAGCATAAAAGTGGACGGTGAACATAAGAGTGGAACTTGTGGCGTGGAAAAGAAAATCCACGAGTGCCCGGTTTGTTTCAGAGTCTTCGCTTCGGGTCAAGCACTTGGGGGACACAAGAGAACCCATGTTACTGGGTCAGCAGCAACCGCAACAGTTCCCTCAAGTTCCGCAAAGTTTGGAAATAGCTTCATAGATCTCAACCTCCCTGCTCCAGTTGACGATGATGATGCTAGCCAAATCGAGAACTCTGCGGTTTCCGATGCTGAATTCATAATAGAGGCTATGACTATGGCTGTTAGAAGACTTGAGGTGGAGTGGAAATTGTGA 1161 0.4729 MEKHKCKLCFRSFSNGRALGGHMRSHMMNLPLSKPEEALSRTIQLSFEAESASSSSSDDDDDDKGLSYGLRENPKRSIRLVDPEFSFAAADTGSVILQDRESESESSKNNPTRRRSKRPWNNNNYYNNNNNNNNNNNNINNNNNDNTNSHSNKRQVLGQKSKTESWVDHEPASSVSDATTEEDVAFCLMMLSRDKWKRQKDQPQLVELEDQYEEEEEEEEEEEEEEDEAFEESEESQETMKLCKNRVRGRYKCETCDKVFRSYQALGGHRASHKKIKVSIKVDGEHKSGTCGVEKKIHECPVCFRVFASGQALGGHKRTHVTGSAATATVPSSSAKFGNSFIDLNLPAPVDDDDASQIENSAVSDAEFIIEAMTMAVRRLEVEWKL 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2130g00001 386 MobiDBLite consensus disorder prediction 198 239 - -
Mupr2130g00001 386 MobiDBLite consensus disorder prediction 116 178 - -
Mupr2130g00001 386 MobiDBLite consensus disorder prediction 96 178 - -
Mupr2130g00001 386 SMART c2h2final6 298 320 IPR013087 -
Mupr2130g00001 386 SMART c2h2final6 251 273 IPR013087 -
Mupr2130g00001 386 SMART c2h2final6 4 26 IPR013087 -
Mupr2130g00001 386 SUPERFAMILY beta-beta-alpha zinc fingers 3 31 IPR036236 -
Mupr2130g00001 386 ProSitePatterns Zinc finger C2H2 type domain signature. 6 26 IPR013087 -
Mupr2130g00001 386 PANTHER ZINC FINGER PROTEIN ZAT1-RELATED 1 369 IPR044303 GO:0006355
Mupr2130g00001 386 ProSiteProfiles Zinc finger C2H2 type domain profile. 251 278 IPR013087 -
Mupr2130g00001 386 Gene3D Classic Zinc Finger 248 320 - -
Mupr2130g00001 386 ProSitePatterns Zinc finger C2H2 type domain signature. 300 320 IPR013087 -
Mupr2130g00001 386 Pfam C2H2-type zinc finger 4 27 - -
Mupr2130g00001 386 Pfam C2H2-type zinc finger 298 320 - -
Mupr2130g00001 386 Pfam C2H2-type zinc finger 250 275 - -
Mupr2130g00001 386 MobiDBLite consensus disorder prediction 208 234 - -
Mupr2130g00001 386 Coils Coil 198 239 - -
Mupr2130g00001 386 ProSiteProfiles Zinc finger C2H2 type domain profile. 298 325 IPR013087 -
Mupr2130g00001 386 ProSitePatterns Zinc finger C2H2 type domain signature. 253 273 IPR013087 -
Mupr2130g00001 386 ProSiteProfiles Zinc finger C2H2 type domain profile. 4 31 IPR013087 -
Mupr2130g00001 386 MobiDBLite consensus disorder prediction 47 70 - -
Mupr2130g00001 386 SUPERFAMILY beta-beta-alpha zinc fingers 250 320 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr2130g00001 Mupr-Chr2130 740 4208 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr2130g00001 1 358 C2H2 Transcription Factor Family AT3G60580 43.478 2.17e-66 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mupr2130g00001 zf-C2H2_6 7.4e-12 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr2130g00001 - - vra:106780254 523.472