Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2123g00004 ATGAAGGGGGAAGTACAGCTTCAGCCTCCATCGGTTATGCAAAGCCCTAGTGATTCCGACCCTTTGCTCCTTAACCAGGATGAGGATGTGTCACCGGGAAGCTCCGGTGAGATCAAGGATGAGGAAGACATCGAGGCTGGCTCACTCCCCTGTTGTCGAATTTGCCTCGAAAGCGATTCTGACCCAGAGGATGAATTGATATCTCCATGCATGTGCAAAGGGACCCAACAGTTTGTCCATCGTTCATGTCTTGATCACTGGCGCTCAGTAAAGGAAGGATTTGCTTTTTCACACTGCACCACCTGCAAAGCCCAATTTCATCTTAGAGTTGAATTATTTGAGGATAACTCCTGGCGTAAAATAAAGTTCAGACTTTTTGTGGCAAGGGATGTTTTCCTTGTTTTTCTGGCTGTACAAACTGTGATTGCAGCTATTGGTGGATTTGCATACATCATGGACAAAGATGGTTCCTTCAGGAACTCATTTGATGATGGCTGGGATAGGATACTGTCAAAGCATCCTATTCCATTTTATTATTGTATTGGAGTGCTGGCCTTCTTTGTACTAATTGGGTTTTTTGGTCTCATACTGCATTGCTCCTCCCTCAATACCAATGACCCCAGAATGGCTGGTTGTCAAAACTGTTGTTATGGATGGGGCATCTTGGATTGTTTTCCCGCATCAATGGAGGCGTGCTTTGCCCTTGTGGTTGTCTTTGTTGTCATCTTTGCAATTCTTGGTATAGCTTATGGTTTTCTTGCTGCCACCATGGCCATTCAAAGAATTTGGCAGAGGCACTACCATATCCTCACCAAGAGGGAGCTTACAAAGGAATACATAGTTGAGGACCTTCGGGGCTGTTATGTCCCACCAAAGTTGGACACAGAACATGAAGGTCGCTTGAAAATGCTTAAGCTCTTGTGA 924 0.4513 MKGEVQLQPPSVMQSPSDSDPLLLNQDEDVSPGSSGEIKDEEDIEAGSLPCCRICLESDSDPEDELISPCMCKGTQQFVHRSCLDHWRSVKEGFAFSHCTTCKAQFHLRVELFEDNSWRKIKFRLFVARDVFLVFLAVQTVIAAIGGFAYIMDKDGSFRNSFDDGWDRILSKHPIPFYYCIGVLAFFVLIGFFGLILHCSSLNTNDPRMAGCQNCCYGWGILDCFPASMEACFALVVVFVVIFAILGIAYGFLAATMAIQRIWQRHYHILTKRELTKEYIVEDLRGCYVPPKLDTEHEGRLKMLKLL 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2123g00004 307 ProSiteProfiles Zinc finger RING-CH-type profile. 44 109 IPR011016 GO:0008270
Mupr2123g00004 307 PANTHER RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN 7 307 - -
Mupr2123g00004 307 CDD RING_CH-C4HC3_MARCH 52 103 - -
Mupr2123g00004 307 MobiDBLite consensus disorder prediction 8 32 - -
Mupr2123g00004 307 SMART ringv_2 51 103 IPR011016 GO:0008270
Mupr2123g00004 307 MobiDBLite consensus disorder prediction 1 43 - -
Mupr2123g00004 307 Pfam RING-variant domain 52 102 IPR011016 GO:0008270
Mupr2123g00004 307 SUPERFAMILY RING/U-box 49 107 - -
Mupr2123g00004 307 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 36 116 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr2123g00004 Mupr-Chr2123 27237 33397 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr2123g00004 1 307 C3H Transcription Factor Family AT1G11020 80.685 1.21e-174 484
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr2123g00004 - - gmx:100818950 596.275