Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2113g00003 ATGGAGAGAGATTTCATGGGTCTCAACTCAAAACAGCCACTGCCTCTGGTAAAGGAGGAGTTGAACGATCATGTGTGCAAAGACTCTGGCATGTATGAAGTCCTCCTAGCTTATTTTGATGGTGATTTCGCGGGCTTCACTAAGGGTTCGATTGCTCAGTGGCCCTTCTCGAACAAAGTATCTGCCCTTCCACATTTGATGTCGTTCAAGGTTTCTCAAGATGATAAGACTAAGAAGATAATTTCTGATCCCATAACATCTGGGCTTCTGTCTGTCTTAAGTCAAGATGCATTTGAGTCTAGTCAGAAACGCTCTGCTGCTGAACCCCAGAAATCTTTCAATCACGATGGGCAAGGTGGCCTTCATTTTTCGCTGACTCCATATCCTGTACAACATGATGTGAATTCTGTGAACCGTCCTCATGATGTGAAGATGTTTTCAGTTTCCAATCAAGCAATTTCAGTTTCCTTGGGGAATCCATTCCTGAAGAATCATTTTGCAACTGCCGGTCAGAGTATGAATGGAACTAATGTGAAGCAGCCATTACTCGGGGGAATACCTGTCATAGCGCCTCATTCAGTTCTTCCCTCTGTTGGTGCTGTTGCTGGAATGACTGAACCATGTGTGAAACCATCTGCACCTTCTGCCCAACTTACCATCTTCTATGCTGGTACTGTCAATGTCTTTGATGATATCTCTGCCGAGAAGGCACAAGCTATAATGTTGTTGGCTGGCAATAGCTTATCTGCATCTTCTAACGTGGCGCAGCCAAAAGTTCAGGTTCCTGTCTCGAAGTTGGCTGGTGGTGATGGTGTGCTTGTGAGTCAACCTGCAATTACACCACCGGGTTCTGGTCTTTCAAGTCCTATATCTGTTTCTTCACATACTGGTGCACAGTCAGGGAGTGGCTCAACTAGCACTGATGAATTTCTGGCAGCTAAAACAACTGGAGTCCCCACCACTGCTGTTAGCAATGTGGAGCCTCCAAATGCAGTCAATGCAACCGCTATGTTGACATCAGCTGTACCTCAGGCTCGGAAAGCATCCTTGGCTCGATTTTTAGAAAAACGCAAGGAAAGGGTGATGAGTGCATCACCATATAACCTCAACAAGAAGTCTGAAGAGGGTGGCACTGCAGAATATGCTGGTGCTAACTTTTCTGCAGCTACTGCCTCAGCTATGCAAGGACAGTAG 1194 0.459 MERDFMGLNSKQPLPLVKEELNDHVCKDSGMYEVLLAYFDGDFAGFTKGSIAQWPFSNKVSALPHLMSFKVSQDDKTKKIISDPITSGLLSVLSQDAFESSQKRSAAEPQKSFNHDGQGGLHFSLTPYPVQHDVNSVNRPHDVKMFSVSNQAISVSLGNPFLKNHFATAGQSMNGTNVKQPLLGGIPVIAPHSVLPSVGAVAGMTEPCVKPSAPSAQLTIFYAGTVNVFDDISAEKAQAIMLLAGNSLSASSNVAQPKVQVPVSKLAGGDGVLVSQPAITPPGSGLSSPISVSSHTGAQSGSGSTSTDEFLAAKTTGVPTTAVSNVEPPNAVNATAMLTSAVPQARKASLARFLEKRKERVMSASPYNLNKKSEEGGTAEYAGANFSAATASAMQGQ 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2113g00003 397 Pfam Jas motif 343 367 IPR018467 -
Mupr2113g00003 397 SMART tify_2 211 246 IPR010399 -
Mupr2113g00003 397 MobiDBLite consensus disorder prediction 277 309 - -
Mupr2113g00003 397 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 144 373 IPR040390 -
Mupr2113g00003 397 MobiDBLite consensus disorder prediction 280 309 - -
Mupr2113g00003 397 ProSiteProfiles Tify domain profile. 211 246 IPR010399 -
Mupr2113g00003 397 Pfam tify domain 213 245 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr2113g00003 Mupr-Chr2113 14502 17615 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr2113g00003 54 373 Tify Gene Family AT3G17860 38.710 6.66e-39 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Mupr2113g00003 tify 6.2e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr2113g00003 K13464 - gmx:100807043 525.783