Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2104g00002 ATGCCAGTCATCGCGGCCAAGCGCAGATTGCGATCTCACCCTTCCTCGCCCCCCCGCAAATCGCCCCGCCGGTGCACCGCCGCAACCCCGACGGAAAACAGATTAAATGCCGATGAAAGCCAAGCCAATCCAGCAGCTGTGAAACCTAAGTGGAATCCCAATGATGGTGAGCAATTGAAGATGGTGAAGTTGGCACTGCACTTGTCCACTGCGCCATCTTCCGCCGTGTGCCGCGAGGAGGAGCAGGATGTGGTTTTAGGGTTCTGCAAGGGGTGCGTTGAGCACCAAAAGGCTGGGAGTCTCTATATATGCGGGTGTCCCGGAACTGGGAAATCGTTGTCTATGGAGAAAGTGAAAGAGCAGTTACTCAATTGGGCTACGGAGGCAGGTCTCCCACAGCCAGATGTTTTATCTGTAAATTGTACAGCCCTTACCAATACATCTGATATTTTCACTAAGATACTTGGGTTAAACCAAGCTCAGGGTAAAAAGGTTTCAGCCACACCCTTACAGCAACTTCAGAACATGTATTCTCAGAAATCGTCTACCAAGAACATGACATTAATAGTAGCTGACGAGTTAGATTATTTGATAACCAAAGACAGAGCTGTGCTCCATGATCTTTTCATGCTCACCACCTTTCCTTTCTCTAGATGTATATTAATAGGCAAGCCTATTGTTGTAAATTTCCGGGCTTACTCTAAAGATCAGATCCTCAAGATTCTTGAAGAAAGGTTAAATGAGCTTCCTTACACTGTCTTCCAACAGCAAGCCCTGGAACTATGTGCTAGGCACTGCACTTTGCAGAAAGTTGCTGCAGCTTCTGGAGACATGCGGAATGCTCTATGTATATGCAGGAGTGCATTAGAGATGCTTGAAGCAGAAATTAGAGAATCTGCCGCCTGTAATTTGAATACTTCATCGGAAGAGAAATCATCCTCTAAACAAAATATTGCTACAGCTCCTGATTTTATGAGAAAACGAGAATTTGATACTGTAAGGACTGATCATATGGCTCTTGCCTTGTCCAAAACATATAGATCCCCGGTGGTGGACACAATACAATCTTTGCCACATCATCAACAGATTATACTCTGCTCTTCTATGAAACATTTTCGTGGAGCCAAGAAAGATACAATCCTTGGAGAGTTGTATAAATCGTATGTGGAGATATGCAAATCATCTTTAATTCCTCCAGCAGGAATCTTAGAATTTTCAAACATGTGCAGAGTGCTAAATGATCAGGGTCTTATTAAACTAGGACAATCTCGAGAGGATAAATTGAGAAGAGTGTCGCCTAAAGTAGATGAAGGTGATATTACTTTTGCACTGCAGCTCACCTCACCTCACCTAGTGAGATAG 1362 0.4427 MPVIAAKRRLRSHPSSPPRKSPRRCTAATPTENRLNADESQANPAAVKPKWNPNDGEQLKMVKLALHLSTAPSSAVCREEEQDVVLGFCKGCVEHQKAGSLYICGCPGTGKSLSMEKVKEQLLNWATEAGLPQPDVLSVNCTALTNTSDIFTKILGLNQAQGKKVSATPLQQLQNMYSQKSSTKNMTLIVADELDYLITKDRAVLHDLFMLTTFPFSRCILIGKPIVVNFRAYSKDQILKILEERLNELPYTVFQQQALELCARHCTLQKVAAASGDMRNALCICRSALEMLEAEIRESAACNLNTSSEEKSSSKQNIATAPDFMRKREFDTVRTDHMALALSKTYRSPVVDTIQSLPHHQQIILCSSMKHFRGAKKDTILGELYKSYVEICKSSLIPPAGILEFSNMCRVLNDQGLIKLGQSREDKLRRVSPKVDEGDITFALQLTSPHLVR 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2104g00002 453 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 65 298 IPR027417 -
Mupr2104g00002 453 Gene3D - 354 437 IPR036388 -
Mupr2104g00002 453 Pfam AAA domain 96 213 IPR003593 GO:0016887
Mupr2104g00002 453 Gene3D - 56 225 IPR027417 -
Mupr2104g00002 453 SUPERFAMILY "Winged helix" DNA-binding domain 350 445 IPR036390 -
Mupr2104g00002 453 MobiDBLite consensus disorder prediction 26 40 - -
Mupr2104g00002 453 Gene3D - 226 353 - -
Mupr2104g00002 453 MobiDBLite consensus disorder prediction 1 53 - -
Mupr2104g00002 453 Pfam CDC6, C terminal winged helix domain 365 443 IPR015163 -
Mupr2104g00002 453 CDD Cdc6_C 358 440 IPR015163 -
Mupr2104g00002 453 PIRSF Cdc6 5 223 IPR016314 GO:0006270|GO:0051301
Mupr2104g00002 453 PIRSF Cdc6 224 448 IPR016314 GO:0006270|GO:0051301
Mupr2104g00002 453 PANTHER CELL DIVISION CONTROL PROTEIN 6-RELATED 19 445 - -
Mupr2104g00002 453 Coils Coil 451 453 - -
Mupr2104g00002 453 SMART Cdc6_C_2 365 444 IPR015163 -
Mupr2104g00002 453 CDD AAA 81 223 - -
Mupr2104g00002 453 FunFam Cell division control protein 357 447 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr2104g00002 20 445 Core DNA Replication Machinery Family AT2G29680 57.081 1.35e-174 497
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr2104g00002 K02213 - gmx:100791200 763.451